MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:55397440-55537441

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
6430584L05Rik	6	55396887 to 55412285	15398	+	lincRNA gene	RIKEN cDNA 6430584L05 gene
D6Jcs25	6	55419848 to 55420151	303		DNA segment	DNA segment, Chr 6, John C. Schimenti 25
Cpgi17474	6	55451681 to 55452762	1081		CpG island	CpG island 17474
Tssr56661	6	55451738 to 55451763	25	+	TSS region	transcription start site region 56661
Tssr56662	6	55451828 to 55451872	44	+	TSS region	transcription start site region 56662
Adcyap1r1	6	55451978 to 55501451	49473	+	protein coding gene	adenylate cyclase activating polypeptide 1 receptor 1
Tssr56663	6	55451995 to 55452051	56	+	TSS region	transcription start site region 56663
Tssr56664	6	55452092 to 55452093	1	+	TSS region	transcription start site region 56664
Tssr56665	6	55452186 to 55452198	12	+	TSS region	transcription start site region 56665
Tssr56666	6	55452215 to 55452226	11	+	TSS region	transcription start site region 56666
Tssr56667	6	55452255 to 55452267	12	+	TSS region	transcription start site region 56667
Tssr56668	6	55452270 to 55452281	11	+	TSS region	transcription start site region 56668
Tssr56669	6	55452289 to 55452298	9	+	TSS region	transcription start site region 56669
Tssr56670	6	55467440 to 55467441	1	+	TSS region	transcription start site region 56670
Tssr56671	6	55484608 to 55484613	5	+	TSS region	transcription start site region 56671
Tssr56672	6	55491230 to 55491243	13	+	TSS region	transcription start site region 56672
Gm44352	6	55533506 to 55533615	109	+	miRNA gene	predicted gene, 44352
Gm34441	6	55537043 to 55651785	114742	+	lncRNA gene	predicted gene, 34441