Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:55188805-55428905

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D6Mit384 6 55199866 to 55199990 124 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 384
Cpgi17473 6 55203247 to 55203609 362 CpG island CpG island 17473
Tssr56650 6 55203381 to 55203459 78 + TSS region transcription start site region 56650
Mindy4 6 55203383 to 55320222 116839 + protein coding gene MINDY lysine 48 deubiquitinase 4
Tssr56651 6 55203460 to 55203496 36 + TSS region transcription start site region 56651
Tssr56652 6 55241153 to 55241154 1 + TSS region transcription start site region 56652
Gm44073 6 55296262 to 55307886 11624 - antisense lncRNA gene predicted gene, 44073
Tssr56653 6 55306890 to 55306904 14 + TSS region transcription start site region 56653
Gm25458 6 55308805 to 55308905 100 - miRNA gene predicted gene, 25458
Gm38819 6 55325636 to 55330842 5206 - lncRNA gene predicted gene, 38819
Tssr1855 6 55336053 to 55336079 26 + TSS region transcription start site region 1855
Tssr56654 6 55336082 to 55336094 12 + TSS region transcription start site region 56654
Tssr56655 6 55336113 to 55336129 16 + TSS region transcription start site region 56655
Tssr1856 6 55336173 to 55336184 11 + TSS region transcription start site region 1856
Tssr1857 6 55336200 to 55336207 7 + TSS region transcription start site region 1857
Tssr56656 6 55336279 to 55336314 35 + TSS region transcription start site region 56656
Tssr56657 6 55336424 to 55336438 14 + TSS region transcription start site region 56657
Aqp1 6 55336432 to 55348555 12123 + protein coding gene aquaporin 1
Tssr56658 6 55336830 to 55336835 5 + TSS region transcription start site region 56658
Tssr56659 6 55376284 to 55376351 67 + TSS region transcription start site region 56659
Ghrhr 6 55376295 to 55388530 12235 + protein coding gene growth hormone releasing hormone receptor
Tssr56660 6 55376374 to 55376379 5 + TSS region transcription start site region 56660
6430584L05Rik 6 55396887 to 55412285 15398 + lincRNA gene RIKEN cDNA 6430584L05 gene
D6Jcs25 6 55419848 to 55420151 303 DNA segment DNA segment, Chr 6, John C. Schimenti 25