Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:41591735-41691753

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38582 6 41558488 to 41603450 44962 + lncRNA gene predicted gene, 38582
D6Mit117 6 41598320 to 41598437 117 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 117
Gm27549 6 41602244 to 41602305 61 - snRNA gene predicted gene, 27549
Cpgi17333 6 41604607 to 41605921 1314 CpG island CpG island 17333
Tssr55974 6 41605024 to 41605033 9 + TSS region transcription start site region 55974
Tssr55975 6 41605148 to 41605175 27 + TSS region transcription start site region 55975
Ephb6 6 41605482 to 41620509 15027 + protein coding gene Eph receptor B6
Tssr55976 6 41605496 to 41605569 73 + TSS region transcription start site region 55976
Tssr55977 6 41605651 to 41605671 20 + TSS region transcription start site region 55977
Trpv6 6 41620624 to 41636405 15781 - protein coding gene transient receptor potential cation channel, subfamily V, member 6
Gm38795 6 41621779 to 41624061 2282 + lncRNA gene predicted gene, 38795
Tssr60584 6 41636310 to 41636313 3 - TSS region transcription start site region 60584
Tssr60585 6 41636337 to 41636365 28 - TSS region transcription start site region 60585
Tssr60586 6 41636372 to 41636384 12 - TSS region transcription start site region 60586
Tssr60587 6 41636389 to 41636409 20 - TSS region transcription start site region 60587
Tssr55978 6 41641718 to 41641733 15 + TSS region transcription start site region 55978
Gm34642 6 41641730 to 41658800 17070 + lncRNA gene predicted gene, 34642
Tssr55979 6 41641735 to 41641753 18 + TSS region transcription start site region 55979
Trpv5 6 41652173 to 41680769 28596 - protein coding gene transient receptor potential cation channel, subfamily V, member 5
Tssr60588 6 41680730 to 41680743 13 - TSS region transcription start site region 60588
Tssr60589 6 41680785 to 41680796 11 - TSS region transcription start site region 60589
Tssr60590 6 41680808 to 41680818 10 - TSS region transcription start site region 60590
Tssr60591 6 41680834 to 41680844 10 - TSS region transcription start site region 60591
Tssr55980 6 41684353 to 41684358 5 + TSS region transcription start site region 55980
Tssr55981 6 41684363 to 41684368 5 + TSS region transcription start site region 55981
Tssr55982 6 41684378 to 41684402 24 + TSS region transcription start site region 55982
Tssr55983 6 41684414 to 41684441 27 + TSS region transcription start site region 55983
Llcfc1 6 41684431 to 41685717 1286 + protein coding gene LLLL and CFNLAS motif containing 1
Tssr55984 6 41684447 to 41684454 7 + TSS region transcription start site region 55984
Kel 6 41686329 to 41704334 18005 - protein coding gene Kell blood group
Tssr60592 6 41687517 to 41687523 6 - TSS region transcription start site region 60592
Tssr60593 6 41687556 to 41687584 28 - TSS region transcription start site region 60593