Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:41526483-41546517

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr60566 6 41532818 to 41532829 11 - TSS region transcription start site region 60566
Tssr60567 6 41532868 to 41532876 8 - TSS region transcription start site region 60567
Tssr55886 6 41532921 to 41532934 13 + TSS region transcription start site region 55886
Tssr55887 6 41532949 to 41532970 21 + TSS region transcription start site region 55887
Tssr55888 6 41532982 to 41533003 21 + TSS region transcription start site region 55888
Tssr55889 6 41533008 to 41533015 7 + TSS region transcription start site region 55889
Tssr55890 6 41533017 to 41533037 20 + TSS region transcription start site region 55890
Tssr55891 6 41533038 to 41533047 9 + TSS region transcription start site region 55891
Tssr55892 6 41533086 to 41533097 11 + TSS region transcription start site region 55892
Tssr55893 6 41533114 to 41533132 18 + TSS region transcription start site region 55893
Tssr55894 6 41533147 to 41533159 12 + TSS region transcription start site region 55894
Tssr55895 6 41533174 to 41533189 15 + TSS region transcription start site region 55895
Trbd1 6 41533201 to 41533212 11 + gene segment T cell receptor beta, D region 1
Tssr55896 6 41533204 to 41533219 15 + TSS region transcription start site region 55896
Tssr55897 6 41533220 to 41533227 7 + TSS region transcription start site region 55897
Tssr55898 6 41533246 to 41533257 11 + TSS region transcription start site region 55898
Tssr55899 6 41533267 to 41533278 11 + TSS region transcription start site region 55899
Tssr55900 6 41533506 to 41533518 12 + TSS region transcription start site region 55900
Tssr55901 6 41533671 to 41533682 11 + TSS region transcription start site region 55901
Tssr55902 6 41533728 to 41533752 24 + TSS region transcription start site region 55902
Tssr55903 6 41533766 to 41533787 21 + TSS region transcription start site region 55903
Tssr55904 6 41533789 to 41533800 11 + TSS region transcription start site region 55904
Tssr55905 6 41533818 to 41533835 17 + TSS region transcription start site region 55905
Tssr55906 6 41533854 to 41533881 27 + TSS region transcription start site region 55906
Trbj1-1 6 41533864 to 41533911 47 + gene segment T cell receptor beta joining 1-1
Tssr55907 6 41533905 to 41533910 5 + TSS region transcription start site region 55907
Tssr55908 6 41533992 to 41534015 23 + TSS region transcription start site region 55908
Trbj1-2 6 41534001 to 41534048 47 + gene segment T cell receptor beta joining 1-2
Tssr55909 6 41534315 to 41534338 23 + TSS region transcription start site region 55909
Trbj1-3 6 41534323 to 41534372 49 + gene segment T cell receptor beta joining 1-3
Tssr55910 6 41534804 to 41534827 23 + TSS region transcription start site region 55910
Trbj1-4 6 41534811 to 41534861 50 + gene segment T cell receptor beta joining 1-4
Tssr55911 6 41534888 to 41534896 8 + TSS region transcription start site region 55911
Tssr55912 6 41535047 to 41535067 20 + TSS region transcription start site region 55912
Tssr55913 6 41535076 to 41535097 21 + TSS region transcription start site region 55913
Trbj1-5 6 41535084 to 41535133 49 + gene segment T cell receptor beta joining 1-5
Tssr55914 6 41535468 to 41535479 11 + TSS region transcription start site region 55914
Tssr55915 6 41535491 to 41535498 7 + TSS region transcription start site region 55915
Tssr55916 6 41535513 to 41535529 16 + TSS region transcription start site region 55916
Tssr55917 6 41535545 to 41535576 31 + TSS region transcription start site region 55917
Trbj1-6 6 41535554 to 41535606 52 + gene segment T cell receptor beta joining 1-6
Trbj1-7 6 41535642 to 41535687 45 + gene segment T cell receptor beta joining 1-7
Tssr55918 6 41536483 to 41536517 34 + TSS region transcription start site region 55918
Trbc1 6 41538219 to 41539665 1446 + gene segment T cell receptor beta, constant region 1
Tssr60568 6 41538687 to 41538692 5 - TSS region transcription start site region 60568
Tssr55919 6 41539069 to 41539080 11 + TSS region transcription start site region 55919
Tssr55920 6 41539199 to 41539211 12 + TSS region transcription start site region 55920
Tssr55921 6 41539241 to 41539253 12 + TSS region transcription start site region 55921
Tssr60569 6 41539281 to 41539294 13 - TSS region transcription start site region 60569
Tssr60570 6 41539855 to 41539898 43 - TSS region transcription start site region 60570
Tssr60571 6 41541259 to 41541267 8 - TSS region transcription start site region 60571
Tssr60572 6 41541753 to 41541777 24 - TSS region transcription start site region 60572
Tssr60573 6 41541782 to 41541799 17 - TSS region transcription start site region 60573
Tssr60574 6 41541802 to 41541816 14 - TSS region transcription start site region 60574
Tssr55922 6 41541890 to 41541903 13 + TSS region transcription start site region 55922
Tssr55923 6 41541944 to 41541954 10 + TSS region transcription start site region 55923
Tssr55924 6 41542045 to 41542079 34 + TSS region transcription start site region 55924
Trbd2 6 41542163 to 41542176 13 + gene segment T cell receptor beta, D region 2
Tssr55925 6 41542544 to 41542557 13 + TSS region transcription start site region 55925
Tssr55926 6 41542564 to 41542581 17 + TSS region transcription start site region 55926
Tssr55927 6 41542606 to 41542622 16 + TSS region transcription start site region 55927
Tssr55928 6 41542644 to 41542663 19 + TSS region transcription start site region 55928
Tssr55929 6 41542720 to 41542777 57 + TSS region transcription start site region 55929
Trbj2-1 6 41542754 to 41542803 49 + gene segment T cell receptor beta joining 2-1
Tssr55930 6 41542949 to 41542972 23 + TSS region transcription start site region 55930
Trbj2-2 6 41542957 to 41543007 50 + gene segment T cell receptor beta joining 2-2
Tssr55931 6 41543066 to 41543077 11 + TSS region transcription start site region 55931
Tssr55932 6 41543198 to 41543205 7 + TSS region transcription start site region 55932
Tssr55933 6 41543216 to 41543234 18 + TSS region transcription start site region 55933
Trbj2-3 6 41543223 to 41543271 48 + gene segment T cell receptor beta joining 2-3
Tssr55934 6 41543322 to 41543333 11 + TSS region transcription start site region 55934
Tssr55935 6 41543339 to 41543351 12 + TSS region transcription start site region 55935
Tssr55936 6 41543354 to 41543379 25 + TSS region transcription start site region 55936
Trbj2-4 6 41543362 to 41543410 48 + gene segment T cell receptor beta joining 2-4
Tssr55937 6 41543445 to 41543473 28 + TSS region transcription start site region 55937
Trbj2-5 6 41543453 to 41543501 48 + gene segment T cell receptor beta joining 2-5
Tssr55938 6 41543495 to 41543504 9 + TSS region transcription start site region 55938
Tssr60575 6 41543545 to 41543555 10 - TSS region transcription start site region 60575
Tssr55939 6 41543572 to 41543577 5 + TSS region transcription start site region 55939
Tssr55940 6 41543581 to 41543620 39 + TSS region transcription start site region 55940
Trbj2-6 6 41543598 to 41543645 47 + pseudogenic gene segment T cell receptor beta joining 2-6
Tssr55941 6 41543625 to 41543642 17 + TSS region transcription start site region 55941
Tssr55942 6 41543670 to 41543703 33 + TSS region transcription start site region 55942
Tssr55943 6 41543802 to 41543827 25 + TSS region transcription start site region 55943
Trbj2-7 6 41543810 to 41543856 46 + gene segment T cell receptor beta joining 2-7
Tssr55944 6 41544002 to 41544029 27 + TSS region transcription start site region 55944
Tssr60576 6 41544269 to 41544279 10 - TSS region transcription start site region 60576
Tssr60577 6 41544356 to 41544369 13 - TSS region transcription start site region 60577
Tssr60578 6 41544377 to 41544390 13 - TSS region transcription start site region 60578
Tssr55945 6 41544509 to 41544520 11 + TSS region transcription start site region 55945
Tssr55946 6 41544820 to 41544833 13 + TSS region transcription start site region 55946
Tssr60579 6 41544834 to 41544857 23 - TSS region transcription start site region 60579
Tssr1821 6 41544865 to 41544890 25 + TSS region transcription start site region 1821
Tssr55947 6 41544994 to 41545017 23 + TSS region transcription start site region 55947
Tssr55948 6 41546077 to 41546095 18 + TSS region transcription start site region 55948
Tssr55949 6 41546263 to 41546306 43 + TSS region transcription start site region 55949