Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:29330468-29430485

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam71f1 6 29319140 to 29336019 16879 + protein coding gene family with sequence similarity 71, member F1
Cpgi17228 6 29335664 to 29335829 165 CpG island CpG island 17228
Cpgi17229 6 29347529 to 29348526 997 CpG island CpG island 17229
Calu 6 29348106 to 29376675 28569 + protein coding gene calumenin
Tssr55240 6 29348114 to 29348123 9 + TSS region transcription start site region 55240
Tssr55241 6 29348136 to 29348142 6 + TSS region transcription start site region 55241
Tssr55242 6 29348143 to 29348159 16 + TSS region transcription start site region 55242
Tssr55243 6 29348163 to 29348165 2 + TSS region transcription start site region 55243
Tssr55244 6 29348175 to 29348184 9 + TSS region transcription start site region 55244
Tssr55245 6 29361410 to 29361425 15 + TSS region transcription start site region 55245
Tssr55246 6 29366117 to 29366134 17 + TSS region transcription start site region 55246
Tssr55247 6 29374477 to 29374480 3 + TSS region transcription start site region 55247
Opn1sw 6 29376671 to 29380513 3842 - protein coding gene opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
Tssr60089 6 29380426 to 29380435 9 - TSS region transcription start site region 60089
Tssr60090 6 29380468 to 29380485 17 - TSS region transcription start site region 60090
Tssr60091 6 29380517 to 29380520 3 - TSS region transcription start site region 60091
n-TPagg6 6 29388824 to 29388895 71 + tRNA gene nuclear encoded tRNA proline 6 (anticodon AGG)
Cpgi17230 6 29396090 to 29396968 878 CpG island CpG island 17230
Ccdc136 6 29396573 to 29426995 30422 + protein coding gene coiled-coil domain containing 136
Tssr55248 6 29396576 to 29396658 82 + TSS region transcription start site region 55248
Gm26220 6 29396617 to 29396705 88 + miRNA gene predicted gene, 26220
Tssr55249 6 29396665 to 29396666 1 + TSS region transcription start site region 55249
Gm44354 6 29397434 to 29397576 142 - miRNA gene predicted gene, 44354
Tssr55250 6 29397545 to 29397556 11 + TSS region transcription start site region 55250
Tssr60092 6 29397659 to 29397661 2 - TSS region transcription start site region 60092
Tssr55251 6 29398920 to 29398931 11 + TSS region transcription start site region 55251
Tssr55252 6 29398959 to 29398966 7 + TSS region transcription start site region 55252
Tssr55253 6 29399198 to 29399211 13 + TSS region transcription start site region 55253
Cpgi17231 6 29402734 to 29403080 346 CpG island CpG island 17231
Tssr55254 6 29402871 to 29402921 50 + TSS region transcription start site region 55254
Tssr60093 6 29415548 to 29415554 6 - TSS region transcription start site region 60093
Tssr55255 6 29419199 to 29419206 7 + TSS region transcription start site region 55255
Tssr55256 6 29419272 to 29419282 10 + TSS region transcription start site region 55256
Tssr55257 6 29419992 to 29420002 10 + TSS region transcription start site region 55257