MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:134975433-135105618

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr59275	6	134981920 to 134981953	33	+	TSS region	transcription start site region 59275
Tssr59276	6	134981998 to 134982002	4	+	TSS region	transcription start site region 59276
Apold1	6	134982001 to 134986836	4835	+	protein coding gene	apolipoprotein L domain containing 1
Gm36428	6	134982136 to 134983587	1451	-	lncRNA gene	predicted gene, 36428
Cpgi18083	6	134983238 to 134984283	1045		CpG island	CpG island 18083
Cpgi18084	6	135011449 to 135011928	479		CpG island	CpG island 18084
Tssr59277	6	135011609 to 135011640	31	+	TSS region	transcription start site region 59277
Ddx47	6	135011612 to 135023776	12164	+	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
Tssr59278	6	135018159 to 135018170	11	+	TSS region	transcription start site region 59278
Cpgi18085	6	135040433 to 135040618	185		CpG island	CpG island 18085
Cpgi18086	6	135065319 to 135065965	646		CpG island	CpG island 18086
Gprc5a	6	135065662 to 135084709	19047	+	protein coding gene	G protein-coupled receptor, family C, group 5, member A
Tssr59279	6	135065666 to 135065682	16	+	TSS region	transcription start site region 59279
Tssr59280	6	135078671 to 135078709	38	+	TSS region	transcription start site region 59280
Tssr59281	6	135078711 to 135078769	58	+	TSS region	transcription start site region 59281
Cpgi18087	6	135078792 to 135079357	565		CpG island	CpG island 18087
Tssr59282	6	135084070 to 135084083	13	+	TSS region	transcription start site region 59282
Tssr59283	6	135084172 to 135084195	23	+	TSS region	transcription start site region 59283