Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:134610468-134897625

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mansc1 6 134609207 to 134632488 23281 - protein coding gene MANSC domain containing 1
Gm43952 6 134624982 to 134625732 750 + unclassified gene predicted gene, 43952
Cpgi18074 6 134632112 to 134632789 677 CpG island CpG island 18074
Tssr63727 6 134632362 to 134632380 18 - TSS region transcription start site region 63727
Tssr63728 6 134632388 to 134632404 16 - TSS region transcription start site region 63728
Borcs5 6 134639512 to 134711184 71672 + protein coding gene BLOC-1 related complex subunit 5
Cpgi18075 6 134640825 to 134641579 754 CpG island CpG island 18075
Tssr59245 6 134640979 to 134641014 35 + TSS region transcription start site region 59245
Tssr59246 6 134641019 to 134641097 78 + TSS region transcription start site region 59246
Tssr59247 6 134641099 to 134641117 18 + TSS region transcription start site region 59247
Tssr63729 6 134645937 to 134645947 10 - TSS region transcription start site region 63729
Gm44017 6 134689859 to 134691302 1443 + sense intronic lncRNA gene predicted gene, 44017
Tssr59248 6 134696019 to 134696022 3 + TSS region transcription start site region 59248
Recrq9 6 134700000 to 73500000 -61200000 QTL recombination rate in male meiosis QTL 9
Dusp16 6 134715468 to 134792625 77157 - protein coding gene dual specificity phosphatase 16
Gm36328 6 134754246 to 134755192 946 + antisense lncRNA gene predicted gene, 36328
Tssr63730 6 134791327 to 134791339 12 - TSS region transcription start site region 63730
Tssr63731 6 134791342 to 134791367 25 - TSS region transcription start site region 63731
Tssr59249 6 134791480 to 134791500 20 + TSS region transcription start site region 59249
Cpgi18076 6 134791728 to 134793474 1746 CpG island CpG island 18076
Tssr63732 6 134792340 to 134792359 19 - TSS region transcription start site region 63732
Tssr63733 6 134792370 to 134792386 16 - TSS region transcription start site region 63733
Tssr63734 6 134792393 to 134792406 13 - TSS region transcription start site region 63734
Tssr63735 6 134792470 to 134792479 9 - TSS region transcription start site region 63735
Tssr63736 6 134792499 to 134792508 9 - TSS region transcription start site region 63736
Tssr63737 6 134792519 to 134792530 11 - TSS region transcription start site region 63737
Tssr63738 6 134792596 to 134792682 86 - TSS region transcription start site region 63738
Tssr63739 6 134792710 to 134792730 20 - TSS region transcription start site region 63739
1700055D16Rik 6 134795584 to 134820690 25106 + lncRNA gene RIKEN cDNA 1700055D16 gene
Cpgi18077 6 134829929 to 134830643 714 CpG island CpG island 18077
Tssr59250 6 134830145 to 134830179 34 + TSS region transcription start site region 59250
Crebl2 6 134830154 to 134858931 28777 + protein coding gene cAMP responsive element binding protein-like 2
Tssr59251 6 134830216 to 134830270 54 + TSS region transcription start site region 59251
Tssr59252 6 134830319 to 134830337 18 + TSS region transcription start site region 59252
Tssr59253 6 134830764 to 134830774 10 + TSS region transcription start site region 59253
Tssr59254 6 134831032 to 134831036 4 + TSS region transcription start site region 59254
Gm44084 6 134835844 to 134836252 408 + pseudogene predicted gene, 44084
Tssr59255 6 134858382 to 134858386 4 + TSS region transcription start site region 59255
Gpr19 6 134869093 to 134898578 29485 - protein coding gene G protein-coupled receptor 19
Cpgi18078 6 134869677 to 134870260 583 CpG island CpG island 18078
Tssr63740 6 134887783 to 134887866 83 - TSS region transcription start site region 63740
Gm40407 6 134888220 to 134890702 2482 + lncRNA gene predicted gene, 40407
Gm44366 6 134889774 to 134892067 2293 - sense intronic lncRNA gene predicted gene, 44366