Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:127790272-128090315

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40402 6 127779196 to 127813083 33887 + lncRNA gene predicted gene, 40402
Tssr59045 6 127790350 to 127790355 5 + TSS region transcription start site region 59045
Tssr63391 6 127794666 to 127794677 11 - TSS region transcription start site region 63391
Tssr63392 6 127794716 to 127794733 17 - TSS region transcription start site region 63392
Tssr63393 6 127794773 to 127794802 29 - TSS region transcription start site region 63393
Tssr63394 6 127796274 to 127796296 22 - TSS region transcription start site region 63394
Tssr63395 6 127796299 to 127796330 31 - TSS region transcription start site region 63395
Tssr63396 6 127796332 to 127796337 5 - TSS region transcription start site region 63396
Tssr63397 6 127796348 to 127796364 16 - TSS region transcription start site region 63397
Tssr59046 6 127796417 to 127796436 19 + TSS region transcription start site region 59046
Tssr59047 6 127796442 to 127796453 11 + TSS region transcription start site region 59047
Tssr59048 6 127796455 to 127796476 21 + TSS region transcription start site region 59048
Tssr59049 6 127796482 to 127796491 9 + TSS region transcription start site region 59049
Tssr59050 6 127796496 to 127796500 4 + TSS region transcription start site region 59050
Gm38902 6 127805232 to 127822122 16890 - lncRNA gene predicted gene, 38902
Gm42811 6 127807951 to 127810718 2767 - unclassified gene predicted gene 42811
Cmv4 6 127838217 to 136045152 8206935 QTL cytomegalovirus resistance 4
Cypr5 6 127838217 to 127838360 143 QTL cytokine production 5
D6Mit52 6 127838217 to 127838360 143 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 52
Gm23098 6 127849221 to 127849519 298 + unclassified non-coding RNA gene predicted gene, 23098
Gm46976 6 127850668 to 127862385 11717 + lncRNA gene predicted gene, 46976
Gm40401 6 127863984 to 127873326 9342 - lncRNA gene predicted gene, 40401
D6Mit337 6 127873958 to 127874144 186 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 337
Gm38901 6 127876251 to 127877330 1079 - lincRNA gene predicted gene, 38901
Tssr59051 6 127887582 to 127887639 57 + TSS region transcription start site region 59051
Tspan11 6 127887599 to 127953031 65432 + protein coding gene tetraspanin 11
Cpgi18044 6 127887694 to 127888146 452 CpG island CpG island 18044
Tssr59052 6 127887708 to 127887757 49 + TSS region transcription start site region 59052
Tssr59053 6 127887763 to 127887777 14 + TSS region transcription start site region 59053
Tssr59054 6 127913710 to 127913732 22 + TSS region transcription start site region 59054
Tssr59055 6 127913827 to 127913838 11 + TSS region transcription start site region 59055
Tssr59056 6 127913851 to 127913866 15 + TSS region transcription start site region 59056
Gm38903 6 127928621 to 127937435 8814 + lncRNA gene predicted gene, 38903
D6Mit377 6 127929379 to 127929527 148 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology-377
Gm15870 6 127934689 to 127944839 10150 - antisense lncRNA gene predicted gene 15870
Tssr59057 6 127940272 to 127940315 43 + TSS region transcription start site region 59057
Tspan9 6 127961396 to 128143594 182198 - protein coding gene tetraspanin 9
Tssr63398 6 128009237 to 128009241 4 - TSS region transcription start site region 63398
Cpgi18045 6 128011877 to 128012168 291 CpG island CpG island 18045
Tssr63399 6 128025690 to 128025713 23 - TSS region transcription start site region 63399
Tssr63400 6 128025740 to 128025787 47 - TSS region transcription start site region 63400
Tssr63401 6 128028914 to 128028919 5 - TSS region transcription start site region 63401
Cpgi18046 6 128034163 to 128035865 1702 CpG island CpG island 18046
Tssr63402 6 128035028 to 128035075 47 - TSS region transcription start site region 63402
Gm34416 6 128039043 to 128043597 4554 + lncRNA gene predicted gene, 34416