Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:127504952-127775068

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr2025 6 127543152 to 127543153 1 + TSS region transcription start site region 2025
Cracr2a 6 127561064 to 127673733 112669 + protein coding gene calcium release activated channel regulator 2A
Cpgi18041 6 127561141 to 127561544 403 CpG island CpG island 18041
Tssr59036 6 127561207 to 127561241 34 + TSS region transcription start site region 59036
Tssr59037 6 127561312 to 127561343 31 + TSS region transcription start site region 59037
Tssr59038 6 127561347 to 127561369 22 + TSS region transcription start site region 59038
Tssr59039 6 127577937 to 127577938 1 + TSS region transcription start site region 59039
Tssr59040 6 127577945 to 127577957 12 + TSS region transcription start site region 59040
Tssr59041 6 127577963 to 127577979 16 + TSS region transcription start site region 59041
Tssr59042 6 127577981 to 127578000 19 + TSS region transcription start site region 59042
Tssr59043 6 127582123 to 127582186 63 + TSS region transcription start site region 59043
Tssr59044 6 127582201 to 127582212 11 + TSS region transcription start site region 59044
D6Mit335 6 127587651 to 127587777 126 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 335
D6Mit368 6 127639952 to 127640068 116 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 368
Gm43634 6 127644440 to 127657925 13485 + lincRNA gene predicted gene 43634
Prmt8 6 127689011 to 127769472 80461 - protein coding gene protein arginine N-methyltransferase 8
Gm38900 6 127723167 to 127726518 3351 - lncRNA gene predicted gene, 38900
Tssr63381 6 127732803 to 127732814 11 - TSS region transcription start site region 63381
Gm42739 6 127763748 to 127763973 225 + pseudogene predicted gene 42739
Cpgi18042 6 127766646 to 127767007 361 CpG island CpG island 18042
Cpgi18043 6 127767222 to 127769863 2641 CpG island CpG island 18043
Gm42738 6 127767542 to 127768905 1363 + antisense lncRNA gene predicted gene 42738
Tssr63382 6 127768775 to 127768790 15 - TSS region transcription start site region 63382
Tssr63383 6 127768968 to 127768993 25 - TSS region transcription start site region 63383
Tssr63384 6 127769112 to 127769135 23 - TSS region transcription start site region 63384
Tssr63385 6 127769142 to 127769164 22 - TSS region transcription start site region 63385
Tssr63386 6 127769174 to 127769196 22 - TSS region transcription start site region 63386
Tssr63387 6 127769306 to 127769364 58 - TSS region transcription start site region 63387
Tssr63388 6 127769427 to 127769456 29 - TSS region transcription start site region 63388
Tssr63389 6 127769700 to 127769708 8 - TSS region transcription start site region 63389
Tssr63390 6 127769721 to 127769731 10 - TSS region transcription start site region 63390
Gm42741 6 127772373 to 127774650 2277 - unclassified gene predicted gene 42741