Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:126699249-127009269

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi18023 6 126701163 to 126701665 502 CpG island CpG island 18023
Kcna6 6 126708329 to 126740674 32345 - protein coding gene potassium voltage-gated channel, shaker-related, subfamily, member 6
Tssr63339 6 126712630 to 126712680 50 - TSS region transcription start site region 63339
Tssr63340 6 126712687 to 126712696 9 - TSS region transcription start site region 63340
Gm33581 6 126718623 to 126758879 40256 + lncRNA gene predicted gene, 33581
Gm26673 6 126718684 to 126741601 22917 + antisense lncRNA gene predicted gene, 26673
Tssr59006 6 126718885 to 126718934 49 + TSS region transcription start site region 59006
Tssr63341 6 126738217 to 126738238 21 - TSS region transcription start site region 63341
Cpgi18024 6 126738229 to 126738726 497 CpG island CpG island 18024
Cpgi18025 6 126739172 to 126740700 1528 CpG island CpG island 18025
Tssr63342 6 126740289 to 126740323 34 - TSS region transcription start site region 63342
Tssr63343 6 126740613 to 126740623 10 - TSS region transcription start site region 63343
Tssr63344 6 126740627 to 126740681 54 - TSS region transcription start site region 63344
Gm20190 6 126761633 to 126784876 23243 + lncRNA gene predicted gene, 20190
Tssr59007 6 126761789 to 126761802 13 + TSS region transcription start site region 59007
Cpgi18026 6 126778549 to 126778703 154 CpG island CpG island 18026
Gm29788 6 126792449 to 126810644 18195 - pseudogene predicted gene, 29788
Tssr59008 6 126808339 to 126808351 12 + TSS region transcription start site region 59008
Tssr59009 6 126821593 to 126821614 21 + TSS region transcription start site region 59009
Ndufa9 6 126821863 to 126849144 27281 - protein coding gene NADH:ubiquinone oxidoreductase subunit A9
1700018A23Rik 6 126822377 to 126825177 2800 + antisense lncRNA gene RIKEN cDNA 1700018A23 gene
Tssr63345 6 126840841 to 126840845 4 - TSS region transcription start site region 63345
Cpgi18027 6 126848658 to 126849241 583 CpG island CpG island 18027
Tssr63346 6 126849109 to 126849141 32 - TSS region transcription start site region 63346
Tssr63347 6 126849147 to 126849149 2 - TSS region transcription start site region 63347
Tssr59010 6 126853091 to 126853116 25 + TSS region transcription start site region 59010
Akap3 6 126853098 to 126874308 21210 + protein coding gene A kinase (PRKA) anchor protein 3
Tssr2023 6 126853123 to 126853128 5 + TSS region transcription start site region 2023
Tssr59011 6 126853139 to 126853154 15 + TSS region transcription start site region 59011
Tssr63348 6 126854249 to 126854269 20 - TSS region transcription start site region 63348
Tssr59012 6 126854372 to 126854383 11 + TSS region transcription start site region 59012
Tssr59013 6 126854398 to 126854403 5 + TSS region transcription start site region 59013
Dyrk4 6 126876020 to 126921839 45819 - protein coding gene dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
Tssr63349 6 126877297 to 126877330 33 - TSS region transcription start site region 63349
Tssr63350 6 126921791 to 126921801 10 - TSS region transcription start site region 63350
Tssr63351 6 126921804 to 126921827 23 - TSS region transcription start site region 63351
Tssr59014 6 126921920 to 126921958 38 + TSS region transcription start site region 59014
Rad51ap1 6 126923415 to 126939701 16286 - protein coding gene RAD51 associated protein 1
Gm17808 6 126931688 to 126932581 893 + pseudogene predicted gene, 17808
Cpgi18028 6 126939035 to 126939803 768 CpG island CpG island 18028
Tssr63352 6 126939524 to 126939604 80 - TSS region transcription start site region 63352
Tssr59015 6 126939957 to 126939988 31 + TSS region transcription start site region 59015
D6Wsu163e 6 126939966 to 126975704 35738 + protein coding gene DNA segment, Chr 6, Wayne State University 163, expressed
Tssr59016 6 126939993 to 126940004 11 + TSS region transcription start site region 59016
Tssr63353 6 126966782 to 126966794 12 - TSS region transcription start site region 63353
Gm43125 6 126984596 to 126985325 729 - pseudogene predicted gene 43125
Tssr59017 6 126990540 to 126990585 45 + TSS region transcription start site region 59017
Gm43124 6 126990596 to 126990873 277 + pseudogene predicted gene 43124