Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:125144878-125185903

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17995 6 125145165 to 125146102 937 CpG island CpG island 17995
Tssr58922 6 125145210 to 125145234 24 + TSS region transcription start site region 58922
Tssr58923 6 125145235 to 125145250 15 + TSS region transcription start site region 58923
Iffo1 6 125145241 to 125161782 16541 + protein coding gene intermediate filament family orphan 1
Tssr58924 6 125145259 to 125145278 19 + TSS region transcription start site region 58924
Tssr58925 6 125145295 to 125145298 3 + TSS region transcription start site region 58925
Tssr58926 6 125145400 to 125145413 13 + TSS region transcription start site region 58926
Cpgi17996 6 125148794 to 125148976 182 CpG island CpG island 17996
Gapdh 6 125161721 to 125166467 4746 - protein coding gene glyceraldehyde-3-phosphate dehydrogenase
Tssr63245 6 125164089 to 125164106 17 - TSS region transcription start site region 63245
Cpgi17997 6 125164878 to 125165903 1025 CpG island CpG island 17997
Tssr63246 6 125165317 to 125165334 17 - TSS region transcription start site region 63246
Tssr63247 6 125165349 to 125165352 3 - TSS region transcription start site region 63247
Tssr63248 6 125165594 to 125165612 18 - TSS region transcription start site region 63248
Tssr63249 6 125165707 to 125165766 59 - TSS region transcription start site region 63249
Tssr63250 6 125166463 to 125166499 36 - TSS region transcription start site region 63250
Ncapd2 6 125168007 to 125191701 23694 - protein coding gene non-SMC condensin I complex, subunit D2
Tssr63251 6 125168986 to 125169000 14 - TSS region transcription start site region 63251
Tssr63252 6 125170787 to 125170824 37 - TSS region transcription start site region 63252
Tssr63253 6 125172055 to 125172064 9 - TSS region transcription start site region 63253