Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:125056244-125132798

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acrbp 6 125049927 to 125063265 13338 + protein coding gene proacrosin binding protein
Tssr58895 6 125067673 to 125067686 13 + TSS region transcription start site region 58895
Tssr58896 6 125067688 to 125067699 11 + TSS region transcription start site region 58896
Tssr58897 6 125067913 to 125067942 29 + TSS region transcription start site region 58897
Lpar5 6 125067920 to 125082472 14552 + protein coding gene lysophosphatidic acid receptor 5
Tssr58898 6 125067952 to 125067955 3 + TSS region transcription start site region 58898
Tssr58899 6 125071267 to 125071289 22 + TSS region transcription start site region 58899
Tssr58900 6 125071292 to 125071305 13 + TSS region transcription start site region 58900
Tssr58901 6 125071326 to 125071345 19 + TSS region transcription start site region 58901
Cpgi17991 6 125071385 to 125071639 254 CpG island CpG island 17991
Cpgi17992 6 125081420 to 125082449 1029 CpG island CpG island 17992
Tssr58902 6 125083173 to 125083184 11 + TSS region transcription start site region 58902
Tssr58903 6 125083228 to 125083240 12 + TSS region transcription start site region 58903
Tssr58904 6 125083252 to 125083263 11 + TSS region transcription start site region 58904
Tssr58905 6 125083421 to 125083441 20 + TSS region transcription start site region 58905
2010008C14Rik 6 125083437 to 125084029 592 + unclassified gene RIKEN cDNA 2010008C14 gene
9130201A16Rik 6 125084866 to 125085850 984 unclassified gene RIKEN cDNA 9130201A16 gene
Gm32616 6 125091244 to 125097798 6554 - lncRNA gene predicted gene, 32616
Cpgi17993 6 125095808 to 125097645 1837 CpG island CpG island 17993
Chd4 6 125095986 to 125130591 34605 + protein coding gene chromodomain helicase DNA binding protein 4
Tssr2015 6 125096010 to 125096036 26 + TSS region transcription start site region 2015
Tssr58906 6 125096132 to 125096141 9 + TSS region transcription start site region 58906
Tssr58907 6 125096145 to 125096158 13 + TSS region transcription start site region 58907
Tssr58908 6 125096169 to 125096189 20 + TSS region transcription start site region 58908
Tssr58909 6 125096744 to 125096773 29 + TSS region transcription start site region 58909
Tssr58910 6 125096786 to 125096799 13 + TSS region transcription start site region 58910
Tssr58911 6 125096808 to 125096840 32 + TSS region transcription start site region 58911
Mir7045 6 125097024 to 125097086 62 + miRNA gene microRNA 7045
Tssr58912 6 125097077 to 125097109 32 + TSS region transcription start site region 58912
Tssr58913 6 125100868 to 125100882 14 + TSS region transcription start site region 58913
Tssr58914 6 125103430 to 125103438 8 + TSS region transcription start site region 58914
Tssr58915 6 125113511 to 125113540 29 + TSS region transcription start site region 58915
Tssr58916 6 125113895 to 125113912 17 + TSS region transcription start site region 58916
Gm23751 6 125121724 to 125121859 135 + snoRNA gene predicted gene, 23751
Tssr58917 6 125122470 to 125122504 34 + TSS region transcription start site region 58917
Tssr58918 6 125129863 to 125129872 9 + TSS region transcription start site region 58918
Tssr58919 6 125130470 to 125130473 3 + TSS region transcription start site region 58919
Cpgi17994 6 125131301 to 125132618 1317 CpG island CpG island 17994
Tssr63243 6 125131757 to 125131770 13 - TSS region transcription start site region 63243
Tssr63244 6 125131786 to 125131819 33 - TSS region transcription start site region 63244
Tssr58920 6 125131869 to 125131953 84 + TSS region transcription start site region 58920
Nop2 6 125131909 to 125144753 12844 + protein coding gene NOP2 nucleolar protein