Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:122336863-122576865

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Phc1 6 122317731 to 122340227 22496 - protein coding gene polyhomeotic 1
Tssr62829 6 122339102 to 122339114 12 - TSS region transcription start site region 62829
Cpgi17945 6 122339158 to 122340350 1192 CpG island CpG island 17945
Tssr62830 6 122339405 to 122339443 38 - TSS region transcription start site region 62830
Tssr62831 6 122339446 to 122339517 71 - TSS region transcription start site region 62831
Tssr62832 6 122339522 to 122339579 57 - TSS region transcription start site region 62832
Tssr62833 6 122339633 to 122339673 40 - TSS region transcription start site region 62833
Tssr62834 6 122339797 to 122339876 79 - TSS region transcription start site region 62834
Tssr58663 6 122339974 to 122340002 28 + TSS region transcription start site region 58663
Tssr62835 6 122340200 to 122340244 44 - TSS region transcription start site region 62835
Tssr62836 6 122340499 to 122340510 11 - TSS region transcription start site region 62836
Tssr62837 6 122340525 to 122340543 18 - TSS region transcription start site region 62837
Tssr62838 6 122340588 to 122340599 11 - TSS region transcription start site region 62838
Tssr58664 6 122340761 to 122340770 9 + TSS region transcription start site region 58664
Tssr58665 6 122341321 to 122341323 2 + TSS region transcription start site region 58665
Tssr62839 6 122342110 to 122342114 4 - TSS region transcription start site region 62839
Tssr58666 6 122342343 to 122342371 28 + TSS region transcription start site region 58666
Tssr58667 6 122342675 to 122342687 12 + TSS region transcription start site region 58667
Tssr58668 6 122342709 to 122342717 8 + TSS region transcription start site region 58668
Tssr62840 6 122344844 to 122344849 5 - TSS region transcription start site region 62840
Tssr62841 6 122344925 to 122344936 11 - TSS region transcription start site region 62841
Tssr62842 6 122345108 to 122345116 8 - TSS region transcription start site region 62842
Tssr62843 6 122345389 to 122345412 23 - TSS region transcription start site region 62843
Tssr62844 6 122345853 to 122345879 26 - TSS region transcription start site region 62844
Tssr58669 6 122345974 to 122345984 10 + TSS region transcription start site region 58669
Tssr58670 6 122365909 to 122365914 5 + TSS region transcription start site region 58670
1700063H04Rik 6 122391379 to 122392687 1308 + lincRNA gene RIKEN cDNA 1700063H04 gene
Cpgi17946 6 122391931 to 122392129 198 CpG island CpG island 17946
Cpgi17947 6 122393155 to 122393498 343 CpG island CpG island 17947
Tssr62845 6 122393460 to 122393474 14 - TSS region transcription start site region 62845
Gm19254 6 122414104 to 122414397 293 + pseudogene predicted gene, 19254
Rimklb 6 122447296 to 122486532 39236 - protein coding gene ribosomal modification protein rimK-like family member B
Tssr62846 6 122455881 to 122455885 4 - TSS region transcription start site region 62846
Tssr58671 6 122456863 to 122456865 2 + TSS region transcription start site region 58671
Gm8430 6 122456904 to 122457374 470 + pseudogene predicted pseudogene 8430
Tssr62847 6 122466554 to 122466597 43 - TSS region transcription start site region 62847
Tssr62848 6 122472698 to 122472710 12 - TSS region transcription start site region 62848
Cpgi17948 6 122485616 to 122487173 1557 CpG island CpG island 17948
Tssr62849 6 122486124 to 122486180 56 - TSS region transcription start site region 62849
Tssr62850 6 122486252 to 122486304 52 - TSS region transcription start site region 62850
Tssr62851 6 122486357 to 122486426 69 - TSS region transcription start site region 62851
Tssr62852 6 122486458 to 122486556 98 - TSS region transcription start site region 62852
Tssr1996 6 122487173 to 122487176 3 - TSS region transcription start site region 1996
Tssr62853 6 122488111 to 122488113 2 - TSS region transcription start site region 62853
Tssr58672 6 122491725 to 122491728 3 + TSS region transcription start site region 58672
Tssr62854 6 122494210 to 122494213 3 - TSS region transcription start site region 62854
Tssr62855 6 122498760 to 122498766 6 - TSS region transcription start site region 62855
Tssr58673 6 122513370 to 122513393 23 + TSS region transcription start site region 58673
Mfap5 6 122513383 to 122529290 15907 + protein coding gene microfibrillar associated protein 5
Tssr58674 6 122513419 to 122513459 40 + TSS region transcription start site region 58674
Tssr1997 6 122513575 to 122513580 5 + TSS region transcription start site region 1997
Tssr58675 6 122513591 to 122513600 9 + TSS region transcription start site region 58675
Tssr58676 6 122513618 to 122513641 23 + TSS region transcription start site region 58676
Tssr58677 6 122513643 to 122513668 25 + TSS region transcription start site region 58677
Tssr58678 6 122513677 to 122513688 11 + TSS region transcription start site region 58678
Tssr58679 6 122521832 to 122521847 15 + TSS region transcription start site region 58679
Tssr62856 6 122545313 to 122545320 7 - TSS region transcription start site region 62856
Tssr62857 6 122545344 to 122545386 42 - TSS region transcription start site region 62857
Tssr58680 6 122553799 to 122553816 17 + TSS region transcription start site region 58680
Aicda 6 122553809 to 122564180 10371 + protein coding gene activation-induced cytidine deaminase
Gm16556 6 122560044 to 122570849 10805 - unclassified non-coding RNA gene predicted gene 16556
Cpgi17949 6 122561085 to 122561281 196 CpG island CpG island 17949
Gm16557 6 122563283 to 122563473 190 - pseudogene predicted gene 16557
Gm8459 6 122566715 to 122567474 759 - pseudogene predicted gene 8459
Tssr62858 6 122570749 to 122570757 8 - TSS region transcription start site region 62858
Tssr62859 6 122570849 to 122570867 18 - TSS region transcription start site region 62859
Tssr1998 6 122570884 to 122570896 12 - TSS region transcription start site region 1998
Tssr62860 6 122571378 to 122571420 42 - TSS region transcription start site region 62860
Tssr58681 6 122571552 to 122571564 12 + TSS region transcription start site region 58681