Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:119470796-119948167

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cia43 6 114182280 to 119760571 5578291 QTL collagen induced arthritis QTL 43
Wnt5b 6 119432531 to 119544347 111816 - protein coding gene wingless-type MMTV integration site family, member 5B
Gm40397 6 119467362 to 119476311 8949 + lncRNA gene predicted gene, 40397
Cpgi17911 6 119478868 to 119481299 2431 CpG island CpG island 17911
Tssr58502 6 119479480 to 119479502 22 + TSS region transcription start site region 58502
Tssr58503 6 119479504 to 119479530 26 + TSS region transcription start site region 58503
Tssr58504 6 119479531 to 119479547 16 + TSS region transcription start site region 58504
Fbxl14 6 119479668 to 119482630 2962 + protein coding gene F-box and leucine-rich repeat protein 14
Tssr58505 6 119479745 to 119479795 50 + TSS region transcription start site region 58505
Tssr62722 6 119480459 to 119480494 35 - TSS region transcription start site region 62722
Tssr58506 6 119481382 to 119481394 12 + TSS region transcription start site region 58506
Tssr58507 6 119481460 to 119481488 28 + TSS region transcription start site region 58507
Tssr58508 6 119481520 to 119481541 21 + TSS region transcription start site region 58508
Tssr58509 6 119481545 to 119481563 18 + TSS region transcription start site region 58509
Tssr62723 6 119481557 to 119481580 23 - TSS region transcription start site region 62723
Tssr58510 6 119481938 to 119481951 13 + TSS region transcription start site region 58510
Tssr58511 6 119515697 to 119515700 3 + TSS region transcription start site region 58511
Tssr62724 6 119517954 to 119517959 5 - TSS region transcription start site region 62724
Gm30690 6 119518005 to 119531087 13082 + lncRNA gene predicted gene, 30690
Cpgi17912 6 119543188 to 119544842 1654 CpG island CpG island 17912
Tssr62725 6 119544282 to 119544304 22 - TSS region transcription start site region 62725
Erc1 6 119570796 to 119848167 277371 - protein coding gene ELKS/RAB6-interacting/CAST family member 1
Gm44317 6 119570941 to 119578057 7116 + antisense lncRNA gene predicted gene, 44317
Tssr62726 6 119673803 to 119673807 4 - TSS region transcription start site region 62726
Tssr58512 6 119690192 to 119690200 8 + TSS region transcription start site region 58512
Tssr62727 6 119714061 to 119714081 20 - TSS region transcription start site region 62727
Tssr62728 6 119818314 to 119818344 30 - TSS region transcription start site region 62728
Cpgi17913 6 119847363 to 119848866 1503 CpG island CpG island 17913
Tssr62729 6 119848069 to 119848078 9 - TSS region transcription start site region 62729
Tssr62730 6 119848093 to 119848113 20 - TSS region transcription start site region 62730
Tssr62731 6 119848120 to 119848168 48 - TSS region transcription start site region 62731
3110021A11Rik 6 119848193 to 119849029 836 + lncRNA gene RIKEN cDNA 3110021A11 gene
Gm15532 6 119892920 to 119893800 880 + pseudogene predicted gene 15532
4930540M05Rik 6 119896159 to 119902653 6494 - lincRNA gene RIKEN cDNA 4930540M05 gene
Cpgi17914 6 119902371 to 119903190 819 CpG island CpG island 17914
Tssr1986 6 119902450 to 119902463 13 + TSS region transcription start site region 1986
Tssr58513 6 119902688 to 119902734 46 + TSS region transcription start site region 58513
Rad52 6 119902698 to 119922828 20130 + protein coding gene RAD52 homolog, DNA repair protein
Tssr58514 6 119902741 to 119902754 13 + TSS region transcription start site region 58514
Tssr58515 6 119904255 to 119904260 5 + TSS region transcription start site region 58515
Cpgi17915 6 119918963 to 119919134 171 CpG island CpG island 17915
Tssr62732 6 119921611 to 119921615 4 - TSS region transcription start site region 62732
Tssr58516 6 119922191 to 119922202 11 + TSS region transcription start site region 58516
Tssr58517 6 119922208 to 119922216 8 + TSS region transcription start site region 58517
Wnk1 6 119923969 to 120038672 114703 - protein coding gene WNK lysine deficient protein kinase 1
Tssr62733 6 119925853 to 119925875 22 - TSS region transcription start site region 62733
Tssr62734 6 119926295 to 119926300 5 - TSS region transcription start site region 62734
Tssr62735 6 119933697 to 119933699 2 - TSS region transcription start site region 62735