Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:116176258-116276264

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmcc1 6 116018611 to 116193374 174763 - protein coding gene transmembrane and coiled coil domains 1
Tssr62560 6 116181517 to 116181521 4 - TSS region transcription start site region 62560
Cpgi17880 6 116192685 to 116194073 1388 CpG island CpG island 17880
Tssr62561 6 116193426 to 116193501 75 - TSS region transcription start site region 62561
Gm8213 6 116195418 to 116195858 440 - pseudogene predicted pseudogene 8213
9530062K07Rik 6 116199410 to 116207993 8583 - bidirectional promoter lncRNA gene RIKEN cDNA 9530062K07 gene
Cpgi17881 6 116207754 to 116208587 833 CpG island CpG island 17881
Washc2 6 116208027 to 116262671 54644 + protein coding gene WASH complex subunit 2`
Tssr58354 6 116208030 to 116208114 84 + TSS region transcription start site region 58354
Tssr58355 6 116208116 to 116208130 14 + TSS region transcription start site region 58355
Tssr58356 6 116208185 to 116208197 12 + TSS region transcription start site region 58356
Tssr58357 6 116226258 to 116226264 6 + TSS region transcription start site region 58357
Tssr58358 6 116226966 to 116226980 14 + TSS region transcription start site region 58358
Gm44103 6 116260434 to 116264095 3661 - unclassified gene predicted gene, 44103
Cpgi17882 6 116263899 to 116264636 737 CpG island CpG island 17882
Tssr62562 6 116264043 to 116264057 14 - TSS region transcription start site region 62562
Tssr58359 6 116264186 to 116264225 39 + TSS region transcription start site region 58359
Zfand4 6 116264222 to 116330302 66080 + protein coding gene zinc finger, AN1-type domain 4
Tssr58360 6 116264227 to 116264266 39 + TSS region transcription start site region 58360
Tssr58361 6 116264273 to 116264282 9 + TSS region transcription start site region 58361