Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:115640944-115710956

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Raf1 6 115618573 to 115676635 58062 - protein coding gene v-raf-leukemia viral oncogene 1
Tssr62519 6 115644527 to 115644558 31 - TSS region transcription start site region 62519
Tssr62520 6 115653995 to 115654002 7 - TSS region transcription start site region 62520
Tssr62521 6 115661731 to 115661749 18 - TSS region transcription start site region 62521
Tssr58319 6 115666952 to 115666970 18 + TSS region transcription start site region 58319
Cpgi17873 6 115675680 to 115677067 1387 CpG island CpG island 17873
Tssr62522 6 115675871 to 115675887 16 - TSS region transcription start site region 62522
Tssr58320 6 115675944 to 115675956 12 + TSS region transcription start site region 58320
D830050J10Rik 6 115675968 to 115677780 1812 + bidirectional promoter lncRNA gene RIKEN cDNA D830050J10 gene
Tssr58321 6 115675983 to 115676004 21 + TSS region transcription start site region 58321
Tssr62523 6 115676472 to 115676578 106 - TSS region transcription start site region 62523
Tssr62524 6 115676601 to 115676618 17 - TSS region transcription start site region 62524
Tssr62525 6 115676623 to 115676642 19 - TSS region transcription start site region 62525
Tssr58322 6 115676714 to 115676754 40 + TSS region transcription start site region 58322
Tssr62526 6 115685450 to 115685498 48 - TSS region transcription start site region 62526
Tssr1970 6 115687862 to 115687864 2 + TSS region transcription start site region 1970
Gm38879 6 115701150 to 115705539 4389 + lncRNA gene predicted gene, 38879