Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:114297936-114583296

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pnhdlc1 6 105564822 to 114368849 8804027 QTL plasma non-HDL cholesterol 1
Slc6a1 6 114282635 to 114317525 34890 + protein coding gene solute carrier family 6 (neurotransmitter transporter, GABA), member 1
Tssr58269 6 114302150 to 114302156 6 + TSS region transcription start site region 58269
Tssr58270 6 114302591 to 114302605 14 + TSS region transcription start site region 58270
Tssr58271 6 114306302 to 114306306 4 + TSS region transcription start site region 58271
Tssr58272 6 114306863 to 114306867 4 + TSS region transcription start site region 58272
Cpgi17862 6 114307743 to 114307935 192 CpG island CpG island 17862
Tssr58273 6 114310184 to 114310194 10 + TSS region transcription start site region 58273
Tssr58274 6 114315409 to 114315426 17 + TSS region transcription start site region 58274
Tssr1966 6 114315665 to 114315674 9 + TSS region transcription start site region 1966
Tssr58275 6 114315680 to 114315689 9 + TSS region transcription start site region 58275
Tssr58276 6 114315727 to 114315737 10 + TSS region transcription start site region 58276
Tssr1967 6 114316247 to 114316256 9 + TSS region transcription start site region 1967
Tssr58277 6 114316645 to 114316664 19 + TSS region transcription start site region 58277
Gm38875 6 114356142 to 114397735 41593 - lncRNA gene predicted gene, 38875
D6Oda26 6 114367221 to 114367406 185 DNA segment DNA segment, Chr 6, Sen-ichi Oda 26
Mvwf2 6 114368732 to 145656013 31287281 QTL modifier of von Willebrand factor 2
D6Mit63 6 114368732 to 114368849 117 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 63
Cpgi17863 6 114397387 to 114398629 1242 CpG island CpG island 17863
Tssr62486 6 114397755 to 114397777 22 - TSS region transcription start site region 62486
Hrh1 6 114397936 to 114483296 85360 + protein coding gene histamine receptor H1
Tssr62487 6 114411458 to 114411461 3 - TSS region transcription start site region 62487
Tssr62488 6 114464316 to 114464354 38 - TSS region transcription start site region 62488
Tssr62489 6 114474995 to 114474996 1 - TSS region transcription start site region 62489