Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:113981379-114281438

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp2b2 6 113743842 to 114042613 298771 - protein coding gene ATPase, Ca++ transporting, plasma membrane 2
Tssr1964 6 114004754 to 114004766 12 + TSS region transcription start site region 1964
Gm15083 6 114004789 to 114052265 47476 + antisense lncRNA gene predicted gene 15083
D6Oda24 6 114024174 to 114024319 145 DNA segment DNA segment, Chr 6, Sen-ichi Oda 24
Cpgi17858 6 114041268 to 114042685 1417 CpG island CpG island 17858
Tssr62483 6 114041953 to 114042003 50 - TSS region transcription start site region 62483
Tssr62484 6 114042020 to 114042097 77 - TSS region transcription start site region 62484
Gm43911 6 114053943 to 114054018 75 + pseudogene predicted gene, 43911
Gm43932 6 114062196 to 114062247 51 + pseudogene predicted gene, 43932
D6Mit30 6 114070456 to 114070638 182 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 30
Gm36023 6 114094350 to 114098987 4637 + lncRNA gene predicted gene, 36023
Cpgi17859 6 114094451 to 114094612 161 CpG island CpG island 17859
Cpgi17860 6 114130707 to 114131850 1143 CpG island CpG island 17860
Tssr58261 6 114131229 to 114131246 17 + TSS region transcription start site region 58261
Slc6a11 6 114131241 to 114249886 118645 + protein coding gene solute carrier family 6 (neurotransmitter transporter, GABA), member 11
Tssr58262 6 114131379 to 114131438 59 + TSS region transcription start site region 58262
D6Mit383 6 114135752 to 114135842 90 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology-383
Tssr62485 6 114165480 to 114165488 8 - TSS region transcription start site region 62485
Gm8132 6 114168884 to 114169523 639 - pseudogene predicted gene 8132
D6Mit329 6 114182280 to 114182454 174 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 329
Cia43 6 114182280 to 119760571 5578291 QTL collagen induced arthritis QTL 43
Tssr58263 6 114248045 to 114248058 13 + TSS region transcription start site region 58263
Tssr58264 6 114248091 to 114248118 27 + TSS region transcription start site region 58264
Tssr58265 6 114248161 to 114248174 13 + TSS region transcription start site region 58265
Tssr58266 6 114248345 to 114248361 16 + TSS region transcription start site region 58266
Tssr58267 6 114248376 to 114248402 26 + TSS region transcription start site region 58267
Tssr1965 6 114249679 to 114249691 12 + TSS region transcription start site region 1965
Gm46972 6 114272429 to 114277114 4685 + lncRNA gene predicted gene, 46972