MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:113700728-113780734

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tatdn2	6	113697050 to 113711069	14019	+	protein coding gene	TatD DNase domain containing 2
Tssr58260	6	113702291 to 113702303	12	+	TSS region	transcription start site region 58260
Mir7042	6	113707208 to 113707265	57	+	miRNA gene	microRNA 7042
Gm26982	6	113714971 to 113716121	1150	+	antisense lncRNA gene	predicted gene, 26982
Ghrl	6	113716119 to 113719880	3761	-	protein coding gene	ghrelin
Tssr62469	6	113717673 to 113717713	40	-	TSS region	transcription start site region 62469
D6Oda23	6	113717974 to 113718116	142		DNA segment	DNA segment, Chr 6, Sen-ichi Oda 23
Gm44033	6	113718584 to 113719278	694	+	unclassified gene	predicted gene, 44033
Tssr62470	6	113719450 to 113719468	18	-	TSS region	transcription start site region 62470
Tssr62471	6	113719880 to 113719883	3	-	TSS region	transcription start site region 62471
Gm44053	6	113725223 to 113726151	928	+	lincRNA gene	predicted gene, 44053
Sec13	6	113728052 to 113740681	12629	-	protein coding gene	SEC13 homolog, nuclear pore and COPII coat complex component
Cpgi17854	6	113740263 to 113740903	640		CpG island	CpG island 17854
Tssr62472	6	113740675 to 113740708	33	-	TSS region	transcription start site region 62472
Tssr1963	6	113740728 to 113740734	6	-	TSS region	transcription start site region 1963
Atp2b2	6	113743842 to 114042613	298771	-	protein coding gene	ATPase, Ca++ transporting, plasma membrane 2
Tssr62473	6	113747121 to 113747125	4	-	TSS region	transcription start site region 62473
Cpgi17855	6	113748349 to 113748941	592		CpG island	CpG island 17855