Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:113662050-113746069

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Irak2 6 113638467 to 113695026 56559 + protein coding gene interleukin-1 receptor-associated kinase 2
Tssr58243 6 113668058 to 113668097 39 + TSS region transcription start site region 58243
Tssr1961 6 113670091 to 113670096 5 + TSS region transcription start site region 1961
Tssr1962 6 113670161 to 113670200 39 + TSS region transcription start site region 1962
Tssr58244 6 113673019 to 113673051 32 + TSS region transcription start site region 58244
Gm43963 6 113676732 to 113679219 2487 - unclassified gene predicted gene, 43963
Tssr58245 6 113681911 to 113681925 14 + TSS region transcription start site region 58245
Tssr58246 6 113682041 to 113682057 16 + TSS region transcription start site region 58246
Tssr58247 6 113684096 to 113684116 20 + TSS region transcription start site region 58247
Gm43912 6 113689855 to 113690392 537 + unclassified gene predicted gene, 43912
Tssr62467 6 113690493 to 113690501 8 - TSS region transcription start site region 62467
Tssr58248 6 113690722 to 113690743 21 + TSS region transcription start site region 58248
Tssr58249 6 113690754 to 113690769 15 + TSS region transcription start site region 58249
Tssr58250 6 113690956 to 113690976 20 + TSS region transcription start site region 58250
Tssr58251 6 113690986 to 113690997 11 + TSS region transcription start site region 58251
Tssr58252 6 113695965 to 113695982 17 + TSS region transcription start site region 58252
Cpgi17853 6 113696607 to 113698172 1565 CpG island CpG island 17853
Tssr62468 6 113696700 to 113696706 6 - TSS region transcription start site region 62468
Tatdn2 6 113697050 to 113711069 14019 + protein coding gene TatD DNase domain containing 2
Tssr58253 6 113697074 to 113697159 85 + TSS region transcription start site region 58253
Tssr58254 6 113697168 to 113697185 17 + TSS region transcription start site region 58254
Tssr58255 6 113697190 to 113697232 42 + TSS region transcription start site region 58255
Tssr58256 6 113697247 to 113697258 11 + TSS region transcription start site region 58256
Tssr58257 6 113697316 to 113697343 27 + TSS region transcription start site region 58257
Tssr58258 6 113697376 to 113697392 16 + TSS region transcription start site region 58258
Tssr58259 6 113697401 to 113697412 11 + TSS region transcription start site region 58259
Tssr58260 6 113702291 to 113702303 12 + TSS region transcription start site region 58260
Mir7042 6 113707208 to 113707265 57 + miRNA gene microRNA 7042
Gm26982 6 113714971 to 113716121 1150 + antisense lncRNA gene predicted gene, 26982
Ghrl 6 113716119 to 113719880 3761 - protein coding gene ghrelin
Tssr62469 6 113717673 to 113717713 40 - TSS region transcription start site region 62469
D6Oda23 6 113717974 to 113718116 142 DNA segment DNA segment, Chr 6, Sen-ichi Oda 23
Gm44033 6 113718584 to 113719278 694 + unclassified gene predicted gene, 44033
Tssr62470 6 113719450 to 113719468 18 - TSS region transcription start site region 62470
Tssr62471 6 113719880 to 113719883 3 - TSS region transcription start site region 62471
Gm44053 6 113725223 to 113726151 928 + lincRNA gene predicted gene, 44053
Sec13 6 113728052 to 113740681 12629 - protein coding gene SEC13 homolog, nuclear pore and COPII coat complex component
Cpgi17854 6 113740263 to 113740903 640 CpG island CpG island 17854
Tssr62472 6 113740675 to 113740708 33 - TSS region transcription start site region 62472
Tssr1963 6 113740728 to 113740734 6 - TSS region transcription start site region 1963
Atp2b2 6 113743842 to 114042613 298771 - protein coding gene ATPase, Ca++ transporting, plasma membrane 2