Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:113567475-113651527

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fancd2 6 113531682 to 113597017 65335 + protein coding gene Fanconi anemia, complementation group D2
Gm46971 6 113575770 to 113577013 1243 + lncRNA gene predicted gene, 46971
Fancd2os 6 113596761 to 113600715 3954 - protein coding gene Fancd2 opposite strand
Tssr62459 6 113600626 to 113600643 17 - TSS region transcription start site region 62459
Tssr62460 6 113600645 to 113600653 8 - TSS region transcription start site region 62460
Tssr58229 6 113600758 to 113600764 6 + TSS region transcription start site region 58229
Cpgi17850 6 113604375 to 113605357 982 CpG island CpG island 17850
Tssr58230 6 113604749 to 113604768 19 + TSS region transcription start site region 58230
Brk1 6 113604772 to 113616951 12179 + protein coding gene BRICK1, SCAR/WAVE actin-nucleating complex subunit
Gm44200 6 113607475 to 113611527 4052 + sense intronic lncRNA gene predicted gene, 44200
Gm44199 6 113610318 to 113612445 2127 - antisense lncRNA gene predicted gene, 44199
Tssr58231 6 113616063 to 113616109 46 + TSS region transcription start site region 58231
Tssr58232 6 113616214 to 113616226 12 + TSS region transcription start site region 58232
Tssr62461 6 113623528 to 113623532 4 - TSS region transcription start site region 62461
Cpgi17851 6 113623671 to 113624865 1194 CpG island CpG island 17851
Tssr58233 6 113623988 to 113624037 49 + TSS region transcription start site region 58233
Vhl 6 113624021 to 113631633 7612 + protein coding gene von Hippel-Lindau tumor suppressor
Tssr58234 6 113624048 to 113624062 14 + TSS region transcription start site region 58234
Tssr58235 6 113624126 to 113624164 38 + TSS region transcription start site region 58235
Tssr58236 6 113624667 to 113624678 11 + TSS region transcription start site region 58236
1700015O11Rik 6 113631649 to 113633144 1495 - lincRNA gene RIKEN cDNA 1700015O11 gene
Tssr62462 6 113633127 to 113633145 18 - TSS region transcription start site region 62462
Cpgi17852 6 113638287 to 113638770 483 CpG island CpG island 17852
Irak2 6 113638467 to 113695026 56559 + protein coding gene interleukin-1 receptor-associated kinase 2
Tssr58237 6 113638483 to 113638544 61 + TSS region transcription start site region 58237
Tssr62463 6 113639363 to 113639377 14 - TSS region transcription start site region 62463
Gm43964 6 113640562 to 113641521 959 - antisense lncRNA gene predicted gene, 43964
Tssr58238 6 113650601 to 113650603 2 + TSS region transcription start site region 58238