MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:112133619-112413886

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi17819	6	112197503 to 112197785	282		CpG island	CpG island 17819
1700054K19Rik	6	112210708 to 112212519	1811	+	lincRNA gene	RIKEN cDNA 1700054K19 gene
n-R5s165	6	112234163 to 112234262	99	-	rRNA gene	nuclear encoded rRNA 5S 165
Clas1	6	112269957 to 147052561	34782604		QTL	carcinogen-induced lung adenoma susceptibility 1
D6Mit54	6	112269957 to 112270141	184		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 54
Tilss4	6	112269957 to 125356785	13086828		QTL	TNF-induced lethal shock susceptibility 3
Tssr62398	6	112271300 to 112271307	7	-	TSS region	transcription start site region 62398
Cpgi17820	6	112273619 to 112273886	267		CpG island	CpG island 17820
Lmcd1	6	112273758 to 112330423	56665	+	protein coding gene	LIM and cysteine-rich domains 1
Tssr58144	6	112273800 to 112273816	16	+	TSS region	transcription start site region 58144
5031434C07Rik	6	112285593 to 112288837	3244	-	antisense lncRNA gene	RIKEN cDNA 5031434C07 gene
Gm44193	6	112293231 to 112295753	2522	+	unclassified gene	predicted gene, 44193
Tssr1958	6	112305062 to 112305073	11	+	TSS region	transcription start site region 1958
Tssr62399	6	112352990 to 112352991	1	-	TSS region	transcription start site region 62399
Ssu2	6	112359324 to 112388023	28699	-	protein coding gene	ssu-2 homolog (C. elegans)
Tssr62400	6	112388013 to 112388037	24	-	TSS region	transcription start site region 62400
Gm38873	6	112393085 to 112398174	5089	+	lncRNA gene	predicted gene, 38873
Gm44336	6	112393350 to 112393817	467	-	pseudogene	predicted gene, 44336