Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:108481004-108661243

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itpr1 6 108213096 to 108551109 338013 + protein coding gene inositol 1,4,5-trisphosphate receptor 1
Mir7661 6 108489743 to 108489803 60 + miRNA gene microRNA 7661
Tssr58065 6 108512429 to 108512431 2 + TSS region transcription start site region 58065
Gm44040 6 108519029 to 108525687 6658 - antisense lncRNA gene predicted gene, 44040
Tssr62387 6 108532625 to 108532646 21 - TSS region transcription start site region 62387
Tssr62388 6 108532787 to 108532806 19 - TSS region transcription start site region 62388
Tssr58066 6 108549892 to 108549907 15 + TSS region transcription start site region 58066
Tssr62389 6 108553093 to 108553097 4 - TSS region transcription start site region 62389
Gm16433 6 108563605 to 108565588 1983 - pseudogene predicted gene 16433
Cpgi17811 6 108571004 to 108571243 239 CpG island CpG island 17811
0610040F04Rik 6 108577039 to 108660934 83895 - antisense lncRNA gene RIKEN cDNA 0610040F04 gene
Gm38167 6 108594508 to 108595685 1177 - unclassified gene predicted gene, 38167
4833447P13Rik 6 108656916 to 108659539 2623 unclassified gene RIKEN cDNA 4833447P13 gene
Gm17055 6 108656917 to 108659537 2620 + unclassified non-coding RNA gene predicted gene 17055
Tssr58067 6 108658610 to 108658621 11 + TSS region transcription start site region 58067
Tssr58068 6 108658654 to 108658670 16 + TSS region transcription start site region 58068
Tssr58069 6 108658759 to 108658770 11 + TSS region transcription start site region 58069
Tssr58070 6 108658803 to 108658813 10 + TSS region transcription start site region 58070
Cpgi17812 6 108659129 to 108661733 2604 CpG island CpG island 17812
Tssr62390 6 108659403 to 108659422 19 - TSS region transcription start site region 62390
Tssr58071 6 108659664 to 108659667 3 + TSS region transcription start site region 58071
Tssr62391 6 108659802 to 108659823 21 - TSS region transcription start site region 62391
Tssr58072 6 108660434 to 108660446 12 + TSS region transcription start site region 58072
Tssr58073 6 108660480 to 108660497 17 + TSS region transcription start site region 58073
Tssr58074 6 108660519 to 108660534 15 + TSS region transcription start site region 58074
Tssr58075 6 108660616 to 108660682 66 + TSS region transcription start site region 58075
Bhlhe40 6 108660629 to 108666925 6296 + protein coding gene basic helix-loop-helix family, member e40
Tssr58076 6 108660772 to 108660787 15 + TSS region transcription start site region 58076
Tssr58077 6 108660855 to 108660866 11 + TSS region transcription start site region 58077