Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:104727748-106627761

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cntn6 6 104492790 to 104863406 370616 + protein coding gene contactin 6
Tmevd1 6 104503360 to 106005603 1502243 QTL Theiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 1
Tssr58033 6 104782730 to 104782734 4 + TSS region transcription start site region 58033
Gm40393 6 104865609 to 104876277 10668 + lncRNA gene predicted gene, 40393
Gm5315 6 105063257 to 105065153 1896 - pseudogene predicted gene 5315
Gm23339 6 105232605 to 105232743 138 + snoRNA gene predicted gene, 23339
Tssr58034 6 105334488 to 105334490 2 + TSS region transcription start site region 58034
D6Mit376 6 105354237 to 105354429 192 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology-376
Gm25570 6 105399719 to 105399798 79 + miRNA gene predicted gene, 25570
Gm19757 6 105481266 to 105492668 11402 - lincRNA gene predicted gene, 19757
Tssr58035 6 105531502 to 105531504 2 + TSS region transcription start site region 58035
Gm4602 6 105531520 to 105531827 307 + pseudogene predicted gene 4602
Pnhdlc1 6 105564822 to 114368849 8804027 QTL plasma non-HDL cholesterol 1
D6Mit37 6 105564822 to 105565071 249 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 37
Gm15631 6 105673064 to 105677581 4517 - lincRNA gene predicted gene 15631
Cpgi17803 6 105677255 to 105678276 1021 CpG island CpG island 17803
Tssr62365 6 105677569 to 105677603 34 - TSS region transcription start site region 62365
Tssr58036 6 105677643 to 105677738 95 + TSS region transcription start site region 58036
Cntn4 6 105677660 to 106699310 1021650 + protein coding gene contactin 4
Tssr58037 6 105677748 to 105677761 13 + TSS region transcription start site region 58037
Tssr58038 6 105677768 to 105677794 26 + TSS region transcription start site region 58038
Tssr58039 6 105677811 to 105677831 20 + TSS region transcription start site region 58039
Gasa3 6 106005405 to 106005603 198 QTL gastritis type A susceptibility locus 3
Ibdq2 6 106005405 to 120917141 14911736 QTL inflammatory bowel disease QTL 2
D6Mit149 6 106005405 to 106005603 198 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 149
D6Mit192 6 106058834 to 106059025 191 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 192
Tssr58040 6 106118924 to 106118952 28 + TSS region transcription start site region 58040
Tssr58041 6 106332444 to 106332446 2 + TSS region transcription start site region 58041
D6Mit286 6 106450231 to 106450346 115 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 286
D6Mit39 6 106569226 to 106569365 139 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 39