Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:99933669-100023684

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vamp9 5 99906254 to 99951092 44838 + protein coding gene vesicle-associated membrane protein 9
4930535B17Rik 5 99947313 to 99948225 912 unclassified gene RIKEN cDNA 4930535B17 gene
Hnrnpd 5 99955935 to 99978938 23003 - protein coding gene heterogeneous nuclear ribonucleoprotein D
Tssr52059 5 99963771 to 99963794 23 - TSS region transcription start site region 52059
Tssr52060 5 99964742 to 99964761 19 - TSS region transcription start site region 52060
Tssr52061 5 99964791 to 99964807 16 - TSS region transcription start site region 52061
Tssr52062 5 99967246 to 99967276 30 - TSS region transcription start site region 52062
Gm42127 5 99967904 to 99976527 8623 - lncRNA gene predicted gene, 42127
Tssr52063 5 99976557 to 99976593 36 - TSS region transcription start site region 52063
Cpgi16102 5 99977659 to 99979559 1900 CpG island CpG island 16102
Gm17092 5 99977686 to 99978858 1172 + antisense lncRNA gene predicted gene 17092
Tssr47472 5 99978503 to 99978570 67 + TSS region transcription start site region 47472
Tssr47473 5 99978571 to 99978633 62 + TSS region transcription start site region 47473
Tssr47474 5 99978669 to 99978684 15 + TSS region transcription start site region 47474
Tssr52064 5 99978848 to 99978859 11 - TSS region transcription start site region 52064
Tssr52065 5 99978902 to 99978913 11 - TSS region transcription start site region 52065
Tssr52066 5 99978914 to 99978966 52 - TSS region transcription start site region 52066
4930524J08Rik 5 99979061 to 99979663 602 + protein coding gene RIKEN cDNA 4930524J08 gene
D5Mit90 5 100023113 to 100023227 114 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 90