Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:99266958-99567443

Filter by:
23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35394 5 99274095 to 99279284 5189 + lincRNA gene predicted gene, 35394
Tssr47457 5 99274651 to 99274664 13 + TSS region transcription start site region 47457
Cpgi16096 5 99280000 to 99280335 335 CpG island CpG island 16096
A930011G23Rik 5 99297244 to 99729060 431816 - lncRNA gene RIKEN cDNA A930011G23 gene
D5Mit91 5 99307426 to 99307631 205 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 91
Tssr52049 5 99327093 to 99327113 20 - TSS region transcription start site region 52049
Tssr52050 5 99327187 to 99327234 47 - TSS region transcription start site region 52050
Tssr47458 5 99336728 to 99336741 13 + TSS region transcription start site region 47458
Tssr47459 5 99336743 to 99336754 11 + TSS region transcription start site region 47459
Tssr47460 5 99336760 to 99336768 8 + TSS region transcription start site region 47460
Tssr47461 5 99336776 to 99336784 8 + TSS region transcription start site region 47461
Tssr52051 5 99363465 to 99363470 5 - TSS region transcription start site region 52051
Tssr47462 5 99365544 to 99365558 14 + TSS region transcription start site region 47462
Gm35314 5 99370273 to 99387829 17556 + lncRNA gene predicted gene, 35314
Tssr47463 5 99385613 to 99385616 3 + TSS region transcription start site region 47463
Cpgi16097 5 99416958 to 99417443 485 CpG island CpG island 16097
Gm42125 5 99480347 to 99488136 7789 - lncRNA gene predicted gene, 42125
Gm35253 5 99488246 to 99498914 10668 - lncRNA gene predicted gene, 35253
Tssr47464 5 99508373 to 99508392 19 + TSS region transcription start site region 47464
Gm35172 5 99508389 to 99511037 2648 + lincRNA gene predicted gene, 35172
Gm16227 5 99509944 to 99510682 738 - sense intronic lncRNA gene predicted gene 16227
D5Mit401 5 99514143 to 99514366 223 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 401
Bbaa3 5 112317856 to 99307426 -13010430 QTL B.burgdorferi-associated arthritis 3