MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:98752753-98934507

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cfap299	5	98329304 to 98802047	472743	+	protein coding gene	cilia and flagella associated protein 299
Gm34563	5	98832753 to 98854507	21754	-	lncRNA gene	predicted gene, 34563
Cpgi16091	5	98836383 to 98836653	270		CpG island	CpG island 16091
Cpgi16092	5	98854387 to 98855697	1310		CpG island	CpG island 16092
Tssr47449	5	98854408 to 98854429	21	+	TSS region	transcription start site region 47449
Bmp3	5	98854415 to 98884053	29638	+	protein coding gene	bone morphogenetic protein 3
Tssr47450	5	98854434 to 98854466	32	+	TSS region	transcription start site region 47450
Tssr47451	5	98854473 to 98854487	14	+	TSS region	transcription start site region 47451
Tssr47452	5	98854553 to 98854562	9	+	TSS region	transcription start site region 47452
Tssr47453	5	98854781 to 98854809	28	+	TSS region	transcription start site region 47453
Tssr47454	5	98854831 to 98854842	11	+	TSS region	transcription start site region 47454
Tssr52011	5	98855088 to 98855092	4	-	TSS region	transcription start site region 52011
Gm42123	5	98874392 to 98891020	16628	-	lncRNA gene	predicted gene, 42123
Tssr47455	5	98880001 to 98880006	5	+	TSS region	transcription start site region 47455
D630004D15Rik	5	98881662 to 98884395	2733		unclassified non-coding RNA gene	RIKEN cDNA D630004D15 gene
Prkg2	5	98929773 to 99037351	107578	-	protein coding gene	protein kinase, cGMP-dependent, type II
Gm10422	5	98930299 to 98931711	1412		unclassified gene	predicted gene 10422
Tssr52012	5	98931709 to 98931713	4	-	TSS region	transcription start site region 52012