Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:96996545-97226554

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm9484 5 96996206 to 96997364 1158 - lincRNA gene predicted gene 9484
Cpgi16078 5 96996771 to 96998472 1701 CpG island CpG island 16078
Tssr1552 5 96997438 to 96997485 47 + TSS region transcription start site region 1552
Tssr47423 5 96997676 to 96997766 90 + TSS region transcription start site region 47423
Bmp2k 5 96997689 to 97091048 93359 + protein coding gene BMP2 inducible kinase
Tssr47424 5 97006513 to 97006522 9 + TSS region transcription start site region 47424
Gm43145 5 97046181 to 97046808 627 + unclassified gene predicted gene 43145
Tssr47425 5 97048798 to 97048806 8 + TSS region transcription start site region 47425
Tssr47426 5 97048876 to 97048888 12 + TSS region transcription start site region 47426
Paqr3 5 97082329 to 97111596 29267 - protein coding gene progestin and adipoQ receptor family member III
Cpgi16079 5 97087131 to 97087822 691 CpG island CpG island 16079
Tssr47427 5 97090822 to 97090847 25 + TSS region transcription start site region 47427
Tssr47428 5 97091249 to 97091253 4 + TSS region transcription start site region 47428
Tssr51971 5 97094111 to 97094113 2 - TSS region transcription start site region 51971
Tssr51972 5 97095806 to 97095822 16 - TSS region transcription start site region 51972
Cpgi16080 5 97111147 to 97111909 762 CpG island CpG island 16080
Tssr51973 5 97111545 to 97111554 9 - TSS region transcription start site region 51973
Tssr51974 5 97111565 to 97111586 21 - TSS region transcription start site region 51974
Tssr51975 5 97111589 to 97111632 43 - TSS region transcription start site region 51975
Gm33609 5 97143026 to 97149848 6822 + lincRNA gene predicted gene, 33609
Tssr47429 5 97195572 to 97195598 26 + TSS region transcription start site region 47429
Gm2861 5 97195586 to 97207964 12378 + lincRNA gene predicted gene 2861
Gm33911 5 97208433 to 97223767 15334 - lncRNA gene predicted gene, 33911