MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:93175478-93237025

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sept11	5	93093437 to 93176447	83010	+	protein coding gene	septin 11
Gm43682	5	93176970 to 93179059	2089	+	unclassified gene	predicted gene 43682
Ccni	5	93181933 to 93206495	24562	-	protein coding gene	cyclin I
Gm43681	5	93183856 to 93185758	1902	-	unclassified gene	predicted gene 43681
Tssr51937	5	93190277 to 93190285	8	-	TSS region	transcription start site region 51937
Tssr51938	5	93192942 to 93192946	4	-	TSS region	transcription start site region 51938
Gm2986	5	93195798 to 93196179	381	+	pseudogene	predicted gene 2986
Tssr51939	5	93205364 to 93205376	12	-	TSS region	transcription start site region 51939
Tssr47377	5	93205470 to 93205483	13	+	TSS region	transcription start site region 47377
Cpgi16071	5	93205478 to 93207025	1547		CpG island	CpG island 16071
Tssr47378	5	93205644 to 93205679	35	+	TSS region	transcription start site region 47378
Tssr51940	5	93205714 to 93205718	4	-	TSS region	transcription start site region 51940
Tssr47379	5	93206003 to 93206020	17	+	TSS region	transcription start site region 47379
Tssr47380	5	93206046 to 93206052	6	+	TSS region	transcription start site region 47380
Tssr51941	5	93206442 to 93206470	28	-	TSS region	transcription start site region 51941
Tssr51942	5	93206489 to 93206498	9	-	TSS region	transcription start site region 51942
2010109A12Rik	5	93206518 to 93213474	6956	+	protein coding gene	RIKEN cDNA 2010109A12 gene
D5Dcr72	5	93210039 to 93210134	95		DNA segment	DNA Segment, Chr 5, Derry C. Roopenian 72
Gm42116	5	93221647 to 93255191	33544	+	lncRNA gene	predicted gene, 42116