Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:90909381-91510842

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42530 5 90922732 to 90924902 2170 + lincRNA gene predicted gene 42530
Tssr47253 5 90930739 to 90930792 53 + TSS region transcription start site region 47253
Tssr47254 5 90930822 to 90930833 11 + TSS region transcription start site region 47254
Cpgi16044 5 90930920 to 90931845 925 CpG island CpG island 16044
Tssr47255 5 90931089 to 90931112 23 + TSS region transcription start site region 47255
Mthfd2l 5 90931196 to 91021368 90172 + protein coding gene methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
Tssr47256 5 90931209 to 90931311 102 + TSS region transcription start site region 47256
Tssr51817 5 90932952 to 90932958 6 - TSS region transcription start site region 51817
E330024J20Rik 5 90934163 to 90937691 3528 unclassified gene RIKEN cDNA E330024J20 gene
Tssr47257 5 90935087 to 90935105 18 + TSS region transcription start site region 47257
Tssr51818 5 91014498 to 91014504 6 - TSS region transcription start site region 51818
Tssr47258 5 91027457 to 91027492 35 + TSS region transcription start site region 47258
Epgn 5 91027517 to 91035212 7695 + protein coding gene epithelial mitogen
Gm19610 5 91051871 to 91074773 22902 - antisense lncRNA gene predicted gene, 19610
D5Ertd566e 5 91070553 to 91070787 234 DNA segment DNA segment, Chr 5, ERATO Doi 566, expressed
Tssr47259 5 91074297 to 91074308 11 + TSS region transcription start site region 47259
Cpgi16045 5 91074484 to 91075021 537 CpG island CpG island 16045
Tssr47260 5 91074611 to 91074629 18 + TSS region transcription start site region 47260
Ereg 5 91074622 to 91093646 19024 + protein coding gene epiregulin
Tssr47261 5 91138043 to 91138045 2 + TSS region transcription start site region 47261
Cpgi16046 5 91139380 to 91140026 646 CpG island CpG island 16046
Tssr47262 5 91139591 to 91139607 16 + TSS region transcription start site region 47262
Areg 5 91139599 to 91148432 8833 + protein coding gene amphiregulin
Tssr47263 5 91141052 to 91141058 6 + TSS region transcription start site region 47263
5033428C03Rik 5 91209381 to 91210842 1461 unclassified gene RIKEN cDNA 5033428C03 gene
Gm23092 5 91217898 to 91218004 106 - snRNA gene predicted gene, 23092
Gm19619 5 91257571 to 91283076 25505 - lincRNA gene predicted gene, 19619
D5Mit360 5 91279093 to 91279198 105 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 360
Tssr51819 5 91283045 to 91283057 12 - TSS region transcription start site region 51819
Cpgi16047 5 91302019 to 91302240 221 CpG island CpG island 16047
Btc 5 91357261 to 91402994 45733 - protein coding gene betacellulin, epidermal growth factor family member
D5Mit6 5 91374504 to 91374638 134 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 6
Tssr51820 5 91402844 to 91402851 7 - TSS region transcription start site region 51820
Tssr51821 5 91402880 to 91402885 5 - TSS region transcription start site region 51821
Tssr51822 5 91402905 to 91402922 17 - TSS region transcription start site region 51822
Tssr51823 5 91403002 to 91403024 22 - TSS region transcription start site region 51823
Gm42110 5 91424312 to 91449889 25577 - lncRNA gene predicted gene, 42110
Tssr47264 5 91450031 to 91450040 9 + TSS region transcription start site region 47264