MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:89473871-90183999

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lfibq5	5	84635994 to 89818182	5182188		QTL	liver fibrosis QTL 5
Gm6366	5	89499152 to 89499977	825	-	pseudogene	predicted gene 6366
Gm43515	5	89522860 to 89525000	2140	+	unclassified gene	predicted gene 43515
Cpgi16035	5	89526951 to 89527106	155		CpG island	CpG island 16035
Npffr2	5	89527429 to 89583740	56311	+	protein coding gene	neuropeptide FF receptor 2
Gm7056	5	89616436 to 89622611	6175	+	lncRNA gene	predicted gene 7056
Tssr51726	5	89676898 to 89676902	4	-	TSS region	transcription start site region 51726
Adamts3	5	89677087 to 89883334	206247	-	protein coding gene	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
Gm25320	5	89681916 to 89682239	323	+	unclassified non-coding RNA gene	predicted gene, 25320
Gm42162	5	89689329 to 89690335	1006	-	pseudogene	predicted gene, 42162
Gm25758	5	89828871 to 89828999	128	+	snoRNA gene	predicted gene, 25758
Cpgi16036	5	89882218 to 89883935	1717		CpG island	CpG island 16036
Tssr51727	5	89883297 to 89883309	12	-	TSS region	transcription start site region 51727
Tssr51728	5	89883321 to 89883343	22	-	TSS region	transcription start site region 51728
Tssr51729	5	89883345 to 89883378	33	-	TSS region	transcription start site region 51729
Tssr51730	5	89883465 to 89883512	47	-	TSS region	transcription start site region 51730
Eif5al3-ps	5	90132229 to 90132675	446	+	pseudogene	eukaryotic translation initiation factor 5A-like 3, pseudogene
D5Mit361	5	90155427 to 90155536	109		DNA segment	DNA Segment, Chr 5, Massachusetts Institute of Technology 361