Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:89441916-89922239

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lfibq5 5 84635994 to 89818182 5182188 QTL liver fibrosis QTL 5
Gc 5 89417522 to 89457898 40376 - protein coding gene vitamin D binding protein
Tssr47070 5 89443408 to 89443445 37 + TSS region transcription start site region 47070
Tssr51718 5 89443473 to 89443493 20 - TSS region transcription start site region 51718
Tssr51719 5 89443514 to 89443535 21 - TSS region transcription start site region 51719
Tssr51720 5 89443559 to 89443583 24 - TSS region transcription start site region 51720
Tssr51721 5 89445317 to 89445328 11 - TSS region transcription start site region 51721
Tssr51722 5 89445346 to 89445366 20 - TSS region transcription start site region 51722
Tssr51723 5 89445371 to 89445389 18 - TSS region transcription start site region 51723
Tssr51724 5 89445394 to 89445432 38 - TSS region transcription start site region 51724
Tssr51725 5 89457763 to 89457784 21 - TSS region transcription start site region 51725
Gm6366 5 89499152 to 89499977 825 - pseudogene predicted gene 6366
Gm43515 5 89522860 to 89525000 2140 + unclassified gene predicted gene 43515
Cpgi16035 5 89526951 to 89527106 155 CpG island CpG island 16035
Npffr2 5 89527429 to 89583740 56311 + protein coding gene neuropeptide FF receptor 2
Gm7056 5 89616436 to 89622611 6175 + lncRNA gene predicted gene 7056
Tssr51726 5 89676898 to 89676902 4 - TSS region transcription start site region 51726
Adamts3 5 89677087 to 89883334 206247 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
Gm25320 5 89681916 to 89682239 323 + unclassified non-coding RNA gene predicted gene, 25320
Gm42162 5 89689329 to 89690335 1006 - pseudogene predicted gene, 42162
Gm25758 5 89828871 to 89828999 128 + snoRNA gene predicted gene, 25758
Cpgi16036 5 89882218 to 89883935 1717 CpG island CpG island 16036
Tssr51727 5 89883297 to 89883309 12 - TSS region transcription start site region 51727
Tssr51728 5 89883321 to 89883343 22 - TSS region transcription start site region 51728
Tssr51729 5 89883345 to 89883378 33 - TSS region transcription start site region 51729
Tssr51730 5 89883465 to 89883512 47 - TSS region transcription start site region 51730