Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:8658205-8798209

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr45121 5 8659958 to 8659960 2 + TSS region transcription start site region 45121
Tssr45122 5 8660021 to 8660028 7 + TSS region transcription start site region 45122
Tssr45123 5 8660040 to 8660047 7 + TSS region transcription start site region 45123
Tssr45124 5 8660059 to 8660099 40 + TSS region transcription start site region 45124
Abcb1a 5 8660077 to 8748575 88498 + protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 1A
Cpgi15535 5 8660191 to 8660586 395 CpG island CpG island 15535
Tssr45125 5 8660605 to 8660623 18 + TSS region transcription start site region 45125
Tssr45126 5 8660633 to 8660652 19 + TSS region transcription start site region 45126
Gm42684 5 8669520 to 8673134 3614 + unclassified gene predicted gene 42684
Gm31157 5 8692556 to 8695776 3220 - lncRNA gene predicted gene, 31157
Tssr45127 5 8728205 to 8728209 4 + TSS region transcription start site region 45127
Gm42686 5 8731661 to 8735768 4107 - unclassified gene predicted gene 42686
Gm5106 5 8781186 to 8798729 17543 - antisense lncRNA gene predicted gene 5106
D5Mit48 5 8797672 to 8797875 203 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 48
Cpgi15536 5 8798076 to 8798718 642 CpG island CpG island 15536
Tssr45128 5 8798139 to 8798164 25 + TSS region transcription start site region 45128
Abcb1b 5 8798147 to 8866314 68167 + protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 1B
Mom5 5 33318293 to 8797672 -24520621 QTL modifier of Min 5