Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:74062710-74462722

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Usp46 5 73998726 to 74068411 69685 - protein coding gene ubiquitin specific peptidase 46
Tssr51377 5 74065662 to 74065675 13 - TSS region transcription start site region 51377
Tssr51378 5 74065736 to 74065758 22 - TSS region transcription start site region 51378
Cpgi15967 5 74067855 to 74068937 1082 CpG island CpG island 15967
Tssr51379 5 74068336 to 74068350 14 - TSS region transcription start site region 51379
Tssr51380 5 74068361 to 74068438 77 - TSS region transcription start site region 51380
Gm43416 5 74092137 to 74093151 1014 - unclassified gene predicted gene 43416
Cpgi15968 5 74092801 to 74093557 756 CpG island CpG island 15968
Tssr46666 5 74093061 to 74093072 11 + TSS region transcription start site region 46666
Tssr46667 5 74093075 to 74093100 25 + TSS region transcription start site region 46667
Dancr 5 74093083 to 74094336 1253 + lncRNA gene differentiation antagonizing non-protein coding RNA
Tssr46668 5 74093112 to 74093129 17 + TSS region transcription start site region 46668
Tssr46669 5 74093132 to 74093139 7 + TSS region transcription start site region 46669
Snora26 5 74093530 to 74093650 120 + snoRNA gene small nucleolar RNA, H/ACA box 26
Cpgi15969 5 74126426 to 74126672 246 CpG island CpG island 15969
Gm32002 5 74160683 to 74165284 4601 + lncRNA gene predicted gene, 32002
A330058E17Rik 5 74172161 to 74176050 3889 - unclassified gene RIKEN cDNA A330058E17 gene
Cpgi15970 5 74194675 to 74195946 1271 CpG island CpG island 15970
Tssr46670 5 74195281 to 74195294 13 + TSS region transcription start site region 46670
Rasl11b 5 74195326 to 74199477 4151 + protein coding gene RAS-like, family 11, member B
D5Buc50 5 74202136 to 74202410 274 DNA segment DNA segment, Chr 5, Bucan 50
Scfd2 5 74204816 to 74531742 326926 - protein coding gene Sec1 family domain containing 2
D5Buc51 5 74236964 to 74237184 220 DNA segment DNA segment, Chr 5, Bucan 51
Gm42599 5 74249148 to 74249616 468 - unclassified gene predicted gene 42599
Tssr51381 5 74262684 to 74262707 23 - TSS region transcription start site region 51381
Tssr51382 5 74262710 to 74262722 12 - TSS region transcription start site region 51382
Gm32064 5 74309332 to 74359666 50334 + lncRNA gene predicted gene, 32064
Gm15981 5 74316578 to 74317034 456 - pseudogene predicted gene 15981
Tssr46671 5 74337702 to 74337709 7 + TSS region transcription start site region 46671
Gm15982 5 74356583 to 74358419 1836 - pseudogene predicted gene 15982
6720475M21Rik 5 74367163 to 74369915 2752 - unclassified gene RIKEN cDNA 6720475M21 gene
Tssr46672 5 74386432 to 74386435 3 + TSS region transcription start site region 46672
Tssr51383 5 74395644 to 74395647 3 - TSS region transcription start site region 51383
Tssr46673 5 74402992 to 74402998 6 + TSS region transcription start site region 46673
Tssr51384 5 74405095 to 74405132 37 - TSS region transcription start site region 51384
Gm43167 5 74429500 to 74431105 1605 - unclassified gene predicted gene 43167
D5Jcs311 5 74435247 to 74435470 223 DNA segment DNA segment, Chr 5, John C. Schimenti 311
Recrq8 5 132500000 to 74300000 -58200000 QTL recombination rate in male meiosis QTL 8