MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:72615004-72655038

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cnga1	5	72603696 to 72642752	39056	-	protein coding gene	cyclic nucleotide gated channel alpha 1
Tssr51315	5	72616775 to 72616784	9	-	TSS region	transcription start site region 51315
Tssr51316	5	72617382 to 72617391	9	-	TSS region	transcription start site region 51316
Gm5297	5	72626858 to 72628028	1170	-	pseudogene	predicted gene 5297
Tssr51317	5	72627937 to 72627942	5	-	TSS region	transcription start site region 51317
Tssr46615	5	72635004 to 72635038	34	+	TSS region	transcription start site region 46615
Tssr51318	5	72636206 to 72636218	12	-	TSS region	transcription start site region 51318
Tssr51319	5	72636227 to 72636236	9	-	TSS region	transcription start site region 51319
Tssr51320	5	72642725 to 72642749	24	-	TSS region	transcription start site region 51320
Tssr51321	5	72642758 to 72642766	8	-	TSS region	transcription start site region 51321
Tssr46616	5	72644409 to 72644418	9	+	TSS region	transcription start site region 46616
4933408A14Rik	5	72644410 to 72646552	2142	+	lincRNA gene	RIKEN cDNA 4933408A14 gene
Cpgi15948	5	72647330 to 72648388	1058		CpG island	CpG island 15948
Tssr51322	5	72647667 to 72647683	16	-	TSS region	transcription start site region 51322
Tssr46617	5	72647779 to 72647801	22	+	TSS region	transcription start site region 46617
Nipal1	5	72647796 to 72671078	23282	+	protein coding gene	NIPA-like domain containing 1
Tssr46618	5	72647810 to 72647853	43	+	TSS region	transcription start site region 46618
D5Buc48	5	72651840 to 72652095	255		DNA segment	DNA segment, Chr 5, Bucan 48