Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:72049241-72379377

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gabrb1 5 71658113 to 72149037 490924 + protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
D5Buc28 5 72082374 to 72082629 255 DNA segment DNA segment, Chr 5, Bucan 28
D5Buc34 5 72097304 to 72097551 247 DNA segment DNA segment, Chr 5, Bucan 34
D5Buc32 5 72126624 to 72126809 185 DNA segment DNA segment, Chr 5, Bucan 32
Cpgi15941 5 72136459 to 72136830 371 CpG island CpG island 15941
D5Buc29 5 72141444 to 72141718 274 DNA segment DNA segment, Chr 5, Bucan 29
D5Buc30e 5 72141807 to 72141970 163 DNA segment DNA segment, Chr 5, Bucan 30 expressed
C030009O12Rik 5 72146379 to 72149034 2655 unclassified gene RIKEN cDNA C030009O12 gene
D5Buc27 5 72150386 to 72151000 614 DNA segment DNA segment, Chr 5, Bucan 27
Commd8 5 72156576 to 72168183 11607 - protein coding gene COMM domain containing 8
Tssr51288 5 72159786 to 72159801 15 - TSS region transcription start site region 51288
Tssr51289 5 72163061 to 72163076 15 - TSS region transcription start site region 51289
Tssr51290 5 72165134 to 72165138 4 - TSS region transcription start site region 51290
Cpgi15942 5 72167712 to 72168289 577 CpG island CpG island 15942
Tssr51291 5 72168118 to 72168138 20 - TSS region transcription start site region 51291
Tssr51292 5 72168142 to 72168199 57 - TSS region transcription start site region 51292
Gm42569 5 72171817 to 72172288 471 - pseudogene predicted gene 42569
Cpgi15943 5 72203167 to 72203646 479 CpG island CpG island 15943
Tssr46609 5 72203296 to 72203364 68 + TSS region transcription start site region 46609
Atp10d 5 72203329 to 72298771 95442 + polymorphic pseudogene ATPase, class V, type 10D
Tssr46610 5 72203378 to 72203388 10 + TSS region transcription start site region 46610
D5Buc25 5 72214241 to 72214377 136 DNA segment DNA segment, Chr 5, Bucan 25
Tssr46611 5 72259494 to 72259513 19 + TSS region transcription start site region 46611
Tssr46612 5 72261421 to 72261428 7 + TSS region transcription start site region 46612
Tssr46613 5 72261432 to 72261437 5 + TSS region transcription start site region 46613
Tssr51293 5 72262066 to 72262079 13 - TSS region transcription start site region 51293
Tssr51294 5 72264597 to 72264606 9 - TSS region transcription start site region 51294
Tssr51295 5 72264610 to 72264624 14 - TSS region transcription start site region 51295
D5Buc23 5 72298057 to 72298368 311 DNA segment DNA segment, Chr 5, Bucan 23
Corin 5 72300025 to 72504473 204448 - protein coding gene corin, serine peptidase
Gm25768 5 72305365 to 72305462 97 - snRNA gene predicted gene, 25768
Gm20647 5 72316354 to 72368048 51694 + antisense lncRNA gene predicted gene 20647
D5Buc22 5 72331403 to 72331574 171 DNA segment DNA segment, Chr 5, Bucan 22
Tssr51296 5 72378730 to 72378732 2 - TSS region transcription start site region 51296