Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:69106785-71266846

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kctd8 5 69109285 to 69341679 232394 - protein coding gene potassium channel tetramerisation domain containing 8
D130004A15Rik 5 69168672 to 69170248 1576 - unclassified gene RIKEN cDNA D130004A15 gene
Gm43371 5 69181083 to 69182113 1030 - unclassified gene predicted gene 43371
Gm43373 5 69217421 to 69220290 2869 - unclassified gene predicted gene 43373
Gm43374 5 69221845 to 69224235 2390 - unclassified gene predicted gene 43374
Gm43230 5 69263585 to 69265713 2128 - unclassified gene predicted gene 43230
Gm43229 5 69275721 to 69277570 1849 - unclassified gene predicted gene 43229
Gm42888 5 69311707 to 69316067 4360 - unclassified gene predicted gene 42888
Cpgi15935 5 69340212 to 69341852 1640 CpG island CpG island 15935
Gm24368 5 69340783 to 69340888 105 + miRNA gene predicted gene, 24368
Tssr51261 5 69341537 to 69341547 10 - TSS region transcription start site region 51261
Tssr51262 5 69341552 to 69341568 16 - TSS region transcription start site region 51262
Tssr51263 5 69341573 to 69341582 9 - TSS region transcription start site region 51263
Tssr51264 5 69341671 to 69341685 14 - TSS region transcription start site region 51264
Tssr51265 5 69341699 to 69341714 15 - TSS region transcription start site region 51265
Gm23932 5 69386066 to 69386172 106 - snRNA gene predicted gene, 23932
Tssr46597 5 69461043 to 69461065 22 + TSS region transcription start site region 46597
Gm5867 5 69461152 to 69461743 591 + pseudogene predicted gene 5867
D5Mit185 5 69466366 to 69466511 145 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 185
Tssr51266 5 69483944 to 69483947 3 - TSS region transcription start site region 51266
Gm42887 5 69503842 to 69504960 1118 - unclassified gene predicted gene 42887
Yipf7 5 69516670 to 69542647 25977 - protein coding gene Yip1 domain family, member 7
Tssr51267 5 69542589 to 69542620 31 - TSS region transcription start site region 51267
Tssr51268 5 69542622 to 69542636 14 - TSS region transcription start site region 51268
3110031N09Rik 5 69556557 to 69556882 325 - unclassified gene RIKEN cDNA 3110031N09 gene
Cpgi15936 5 69556577 to 69557606 1029 CpG island CpG island 15936
Guf1 5 69556907 to 69575777 18870 + protein coding gene GUF1 homolog, GTPase
Tssr46598 5 69556936 to 69557018 82 + TSS region transcription start site region 46598
Gnpda2 5 69574998 to 69592332 17334 - protein coding gene glucosamine-6-phosphate deaminase 2
Tssr51269 5 69590766 to 69590774 8 - TSS region transcription start site region 51269
Tssr51270 5 69590783 to 69590803 20 - TSS region transcription start site region 51270
Cpgi15937 5 69591886 to 69592419 533 CpG island CpG island 15937
Tssr51271 5 69592245 to 69592256 11 - TSS region transcription start site region 51271
Tssr51272 5 69592278 to 69592308 30 - TSS region transcription start site region 51272
Tssr51273 5 69592311 to 69592318 7 - TSS region transcription start site region 51273
Gm26044 5 69752403 to 69752528 125 - snRNA gene predicted gene, 26044
D5Mit83 5 69890511 to 69890660 149 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 83
Tssr46599 5 69919093 to 69919099 6 + TSS region transcription start site region 46599
Gm23661 5 69919095 to 69919181 86 + snRNA gene predicted gene, 23661
Gm43139 5 69931525 to 69931808 283 - pseudogene predicted gene 43139
Tssr46600 5 70086573 to 70086576 3 + TSS region transcription start site region 46600
D5Mit304 5 70149513 to 70149635 122 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 304
Tssr1505 5 70176569 to 70176570 1 + TSS region transcription start site region 1505
Gm23067 5 70186785 to 70186846 61 - snRNA gene predicted gene, 23067
D5Dcr69 5 70374534 to 70374629 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 69
Gm26072 5 70550841 to 70550947 106 - snRNA gene predicted gene, 26072
Gm42652 5 70553608 to 70554221 613 - pseudogene predicted gene 42652
Gm42653 5 70561265 to 70564103 2838 + unclassified gene predicted gene 42653
D5Buc6 5 70651551 to 70651764 213 DNA segment DNA segment, Chr 5, Bucan 6
D5Buc7 5 70719575 to 70719781 206 DNA segment DNA segment, Chr 5, Bucan 7
D5Buc8 5 70741664 to 70741857 193 DNA segment DNA segment, Chr 5, Bucan 8
Gabrg1 5 70751047 to 70842617 91570 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
D5Buc9 5 70758873 to 70759076 203 DNA segment DNA segment, Chr 5, Bucan 9
Tssr51274 5 70842292 to 70842338 46 - TSS region transcription start site region 51274
Tssr51275 5 70842347 to 70842370 23 - TSS region transcription start site region 51275
Tssr51276 5 70842373 to 70842388 15 - TSS region transcription start site region 51276
D5Buc10 5 70855054 to 70855207 153 DNA segment DNA segment, Chr 5, Bucan 10
D5Buc12 5 70866416 to 70866593 177 DNA segment DNA segment, Chr 5, Bucan 12
D5Buc11 5 70876045 to 70876201 156 DNA segment DNA segment, Chr 5, Bucan 11
D5Buc13 5 70895506 to 70895688 182 DNA segment DNA segment, Chr 5, Bucan 13
D5Buc14 5 70923019 to 70923170 151 DNA segment DNA segment, Chr 5, Bucan 14
Gabra2 5 70959997 to 71095849 135852 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
Tssr51277 5 70960464 to 70960466 2 - TSS region transcription start site region 51277
Tssr51278 5 70960502 to 70960546 44 - TSS region transcription start site region 51278
D5Buc15 5 70982114 to 70982328 214 DNA segment DNA segment, Chr 5, Bucan 15
D5Buc16 5 71025404 to 71025552 148 DNA segment DNA segment, Chr 5, Bucan 16
D5Buc17 5 71025417 to 71025633 216 DNA segment DNA segment, Chr 5, Bucan 17
D5Buc18 5 71038993 to 71039216 223 DNA segment DNA segment, Chr 5, Bucan 18
D5Buc19 5 71072845 to 71073067 222 DNA segment DNA segment, Chr 5, Bucan 19
Cpgi15938 5 71095138 to 71096514 1376 CpG island CpG island 15938
Tssr51279 5 71095740 to 71095758 18 - TSS region transcription start site region 51279
Tssr51280 5 71095765 to 71095862 97 - TSS region transcription start site region 51280
Tssr51281 5 71095927 to 71095965 38 - TSS region transcription start site region 51281