Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:66171005-66473017

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26725 5 66151212 to 66174945 23733 + antisense lncRNA gene predicted gene, 26725
1700126H18Rik 5 66166607 to 66191335 24728 - antisense lncRNA gene RIKEN cDNA 1700126H18 gene
Gm40311 5 66171692 to 66172207 515 - lncRNA gene predicted gene, 40311
Tssr51197 5 66173051 to 66173058 7 - TSS region transcription start site region 51197
Gm43772 5 66174965 to 66175343 378 - pseudogene predicted gene 43772
Tssr46526 5 66195577 to 66195585 8 + TSS region transcription start site region 46526
Tssr46527 5 66195599 to 66195608 9 + TSS region transcription start site region 46527
Gm15794 5 66197878 to 66198911 1033 - pseudogene predicted gene 15794
Tssr51198 5 66214544 to 66214545 1 - TSS region transcription start site region 51198
Gm3822 5 66214747 to 66217681 2934 + protein coding gene predicted gene 3822
Tssr46528 5 66215759 to 66215807 48 + TSS region transcription start site region 46528
D5Dcr67 5 66221079 to 66221174 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 67
Cpgi15907 5 66223035 to 66223417 382 CpG island CpG island 15907
D5Dcr68 5 66246456 to 66246551 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 68
Cpgi15908 5 66259812 to 66260399 587 CpG island CpG island 15908
Tssr46529 5 66259863 to 66259887 24 + TSS region transcription start site region 46529
Tssr46530 5 66259890 to 66259904 14 + TSS region transcription start site region 46530
Nsun7 5 66259897 to 66298026 38129 + protein coding gene NOL1/NOP2/Sun domain family, member 7
Tssr46531 5 66260116 to 66260120 4 + TSS region transcription start site region 46531
Tssr46532 5 66260121 to 66260170 49 + TSS region transcription start site region 46532
Apbb2 5 66298703 to 66618784 320081 - protein coding gene amyloid beta (A4) precursor protein-binding, family B, member 2
Tssr51199 5 66299331 to 66299342 11 - TSS region transcription start site region 51199
Tssr51200 5 66299367 to 66299382 15 - TSS region transcription start site region 51200
Tssr51201 5 66299400 to 66299419 19 - TSS region transcription start site region 51201
Tssr51202 5 66299924 to 66299932 8 - TSS region transcription start site region 51202
Gm43790 5 66321005 to 66323017 2012 - unclassified gene predicted gene 43790
Tssr51203 5 66323701 to 66323713 12 - TSS region transcription start site region 51203
Tssr51204 5 66323728 to 66323748 20 - TSS region transcription start site region 51204
Gm23183 5 66325740 to 66326062 322 - unclassified non-coding RNA gene predicted gene, 23183
Tssr51205 5 66333434 to 66333437 3 - TSS region transcription start site region 51205
Cpgi15909 5 66337312 to 66337824 512 CpG island CpG island 15909
Tssr51206 5 66337625 to 66337646 21 - TSS region transcription start site region 51206
Tssr51207 5 66337647 to 66337677 30 - TSS region transcription start site region 51207
Gm43793 5 66345893 to 66347225 1332 - unclassified gene predicted gene 43793
Gm16273 5 66356918 to 66357185 267 + pseudogene predicted gene 16273
Tssr51208 5 66416859 to 66416865 6 - TSS region transcription start site region 51208
Gm43792 5 66429917 to 66432126 2209 - unclassified gene predicted gene 43792
Gm43794 5 66443732 to 66444423 691 - unclassified gene predicted gene 43794
Tssr51209 5 66451651 to 66451664 13 - TSS region transcription start site region 51209
Cpgi15910 5 66466188 to 66466706 518 CpG island CpG island 15910