Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:66003519-66093523

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9130230L23Rik 5 65987928 to 66004285 16357 - protein coding gene RIKEN cDNA 9130230L23 gene
Tssr51157 5 66003601 to 66003605 4 - TSS region transcription start site region 51157
Tssr51158 5 66004278 to 66004291 13 - TSS region transcription start site region 51158
Gm40310 5 66008325 to 66010377 2052 - lncRNA gene predicted gene, 40310
Rbm47 5 66016549 to 66151954 135405 - protein coding gene RNA binding motif protein 47
Tssr51159 5 66017618 to 66017622 4 - TSS region transcription start site region 51159
Tssr51160 5 66018560 to 66018575 15 - TSS region transcription start site region 51160
Tssr51161 5 66019005 to 66019009 4 - TSS region transcription start site region 51161
Cpgi15903 5 66019170 to 66019462 292 CpG island CpG island 15903
Tssr51162 5 66019266 to 66019293 27 - TSS region transcription start site region 51162
Tssr51163 5 66019422 to 66019434 12 - TSS region transcription start site region 51163
Tssr51164 5 66022701 to 66022723 22 - TSS region transcription start site region 51164
Tssr51165 5 66025063 to 66025090 27 - TSS region transcription start site region 51165
D5Ertd700e 5 66025550 to 66025792 242 DNA segment DNA segment, Chr 5, ERATO Doi 700, expressed
Cpgi15904 5 66026115 to 66027270 1155 CpG island CpG island 15904
D5Mit258 5 66042304 to 66042428 124 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 258
Tssr51166 5 66042641 to 66042645 4 - TSS region transcription start site region 51166
Tssr51167 5 66048519 to 66048523 4 - TSS region transcription start site region 51167
Tssr51168 5 66050357 to 66050369 12 - TSS region transcription start site region 51168
Tssr51169 5 66052753 to 66052775 22 - TSS region transcription start site region 51169
Tssr46522 5 66053125 to 66053136 11 + TSS region transcription start site region 46522
Tssr46523 5 66053138 to 66053149 11 + TSS region transcription start site region 46523
Tssr51170 5 66054499 to 66054561 62 - TSS region transcription start site region 51170
Gm43775 5 66069501 to 66072895 3394 - unclassified gene predicted gene 43775
Cpgi15905 5 66069581 to 66069954 373 CpG island CpG island 15905
Tssr1497 5 66069967 to 66069984 17 - TSS region transcription start site region 1497
D5Dcr46 5 66075450 to 66075547 97 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 46
Gm43323 5 66080209 to 66084466 4257 - unclassified gene predicted gene 43323
D5Ertd77e 5 66080244 to 66080473 229 DNA segment DNA segment, Chr 5, ERATO Doi 77, expressed
Tssr51171 5 66080971 to 66081009 38 - TSS region transcription start site region 51171
Tssr51172 5 66081803 to 66081816 13 - TSS region transcription start site region 51172
Tssr1498 5 66082304 to 66082311 7 - TSS region transcription start site region 1498
D5Dcr47 5 66083904 to 66084000 96 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 47
Tssr51173 5 66084696 to 66084700 4 - TSS region transcription start site region 51173