MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:64805955-64835959

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Klf3	5	64803523 to 64832903	29380	+	protein coding gene	Kruppel-like factor 3 (basic)
Tssr51069	5	64806263 to 64806278	15	-	TSS region	transcription start site region 51069
Tssr46416	5	64806361 to 64806364	3	+	TSS region	transcription start site region 46416
Tssr46417	5	64810218 to 64810262	44	+	TSS region	transcription start site region 46417
Tssr46418	5	64812336 to 64812350	14	+	TSS region	transcription start site region 46418
Tssr46419	5	64812360 to 64812378	18	+	TSS region	transcription start site region 46419
Tssr51070	5	64812783 to 64812796	13	-	TSS region	transcription start site region 51070
Gm31684	5	64816838 to 64819750	2912	+	lncRNA gene	predicted gene, 31684
Tssr46420	5	64820955 to 64820959	4	+	TSS region	transcription start site region 46420
Tssr46421	5	64821915 to 64821930	15	+	TSS region	transcription start site region 46421
Tssr46422	5	64822078 to 64822108	30	+	TSS region	transcription start site region 46422
Tssr46423	5	64822117 to 64822173	56	+	TSS region	transcription start site region 46423
Tssr46424	5	64822220 to 64822246	26	+	TSS region	transcription start site region 46424
Tssr46425	5	64822984 to 64823010	26	+	TSS region	transcription start site region 46425
Cpgi15889	5	64826596 to 64826757	161		CpG island	CpG island 15889
Tssr46426	5	64829879 to 64829900	21	+	TSS region	transcription start site region 46426
Tssr46427	5	64830018 to 64830045	27	+	TSS region	transcription start site region 46427
Tssr46428	5	64830464 to 64830468	4	+	TSS region	transcription start site region 46428