Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:53699606-54013965

Filter by:
22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cckar 5 53698485 to 53707767 9282 - protein coding gene cholecystokinin A receptor
Tssr51031 5 53706513 to 53706525 12 - TSS region transcription start site region 51031
Tssr51032 5 53707312 to 53707328 16 - TSS region transcription start site region 51032
Tssr51033 5 53707508 to 53707519 11 - TSS region transcription start site region 51033
Tssr51034 5 53707532 to 53707590 58 - TSS region transcription start site region 51034
Cpgi15870 5 53809514 to 53809850 336 CpG island CpG island 15870
Tbc1d19 5 53809606 to 53903965 94359 + protein coding gene TBC1 domain family, member 19
Tssr46263 5 53809613 to 53809629 16 + TSS region transcription start site region 46263
Tssr46264 5 53809632 to 53809683 51 + TSS region transcription start site region 46264
Gm43268 5 53905164 to 53909218 4054 + unclassified gene predicted gene 43268
Gm43266 5 53918444 to 53920214 1770 + unclassified gene predicted gene 43266
Gm40305 5 53927581 to 53950993 23412 + lncRNA gene predicted gene, 40305
Gm30601 5 53995215 to 53996613 1398 + lncRNA gene predicted gene, 30601
Cpgi15871 5 53995262 to 53995782 520 CpG island CpG island 15871
Cpgi15872 5 53998062 to 53999542 1480 CpG island CpG island 15872
Tssr46265 5 53998374 to 53998442 68 + TSS region transcription start site region 46265
Tssr46266 5 53998472 to 53998488 16 + TSS region transcription start site region 46266
Stim2 5 53998499 to 54121057 122558 + protein coding gene stromal interaction molecule 2
Tssr46267 5 53998551 to 53998575 24 + TSS region transcription start site region 46267
Tssr46268 5 53998664 to 53998680 16 + TSS region transcription start site region 46268
Tssr46269 5 53998695 to 53998707 12 + TSS region transcription start site region 46269
Tssr51035 5 53999491 to 53999502 11 - TSS region transcription start site region 51035