Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:53449260-53592731

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr46216 5 53466076 to 53466110 34 + TSS region transcription start site region 46216
Tssr46217 5 53466116 to 53466131 15 + TSS region transcription start site region 46217
Rbpj 5 53466152 to 53657362 191210 + protein coding gene recombination signal binding protein for immunoglobulin kappa J region
Tssr1481 5 53469725 to 53469772 47 + TSS region transcription start site region 1481
Tssr46218 5 53471308 to 53471352 44 + TSS region transcription start site region 46218
Tssr51021 5 53505504 to 53505523 19 - TSS region transcription start site region 51021
Tssr51022 5 53510573 to 53510604 31 - TSS region transcription start site region 51022
Gm10441 5 53519260 to 53522731 3471 - antisense lncRNA gene predicted gene 10441
Cpgi15868 5 53525748 to 53526021 273 CpG island CpG island 15868
Tssr46219 5 53532274 to 53532287 13 + TSS region transcription start site region 46219
Tssr46220 5 53532302 to 53532309 7 + TSS region transcription start site region 46220
Tssr46221 5 53532320 to 53532329 9 + TSS region transcription start site region 46221
Gm40304 5 53546181 to 53547114 933 - antisense lncRNA gene predicted gene, 40304
Tssr46222 5 53555773 to 53555784 11 + TSS region transcription start site region 46222
Tssr46223 5 53555795 to 53555819 24 + TSS region transcription start site region 46223
Cpgi15869 5 53588536 to 53591508 2972 CpG island CpG island 15869
Tssr46224 5 53588752 to 53588767 15 + TSS region transcription start site region 46224
Tssr46225 5 53588960 to 53588965 5 + TSS region transcription start site region 46225
Tssr51023 5 53589254 to 53589265 11 - TSS region transcription start site region 51023
Tssr46226 5 53589429 to 53589444 15 + TSS region transcription start site region 46226
Tssr51024 5 53590178 to 53590192 14 - TSS region transcription start site region 51024
Tssr46227 5 53590339 to 53590351 12 + TSS region transcription start site region 46227
Tssr46228 5 53590353 to 53590377 24 + TSS region transcription start site region 46228
Tssr46229 5 53590422 to 53590433 11 + TSS region transcription start site region 46229
Tssr46230 5 53590453 to 53590529 76 + TSS region transcription start site region 46230
Tssr51025 5 53590572 to 53590589 17 - TSS region transcription start site region 51025
Tssr46231 5 53590656 to 53590668 12 + TSS region transcription start site region 46231
Tssr46232 5 53590673 to 53590703 30 + TSS region transcription start site region 46232
Tssr46233 5 53590721 to 53590722 1 + TSS region transcription start site region 46233
Tssr46234 5 53591059 to 53591066 7 + TSS region transcription start site region 46234
Tssr46235 5 53591233 to 53591242 9 + TSS region transcription start site region 46235
Tssr46236 5 53591248 to 53591260 12 + TSS region transcription start site region 46236
Tssr46237 5 53591400 to 53591407 7 + TSS region transcription start site region 46237
Tssr46238 5 53591466 to 53591478 12 + TSS region transcription start site region 46238
Tssr46239 5 53591529 to 53591540 11 + TSS region transcription start site region 46239
Tssr46240 5 53591596 to 53591607 11 + TSS region transcription start site region 46240
Tssr46241 5 53591917 to 53591965 48 + TSS region transcription start site region 46241