Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:45670020-45872180

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi15841 5 45669245 to 45670496 1251 CpG island CpG island 15841
Ncapg 5 45669919 to 45700546 30627 + protein coding gene non-SMC condensin I complex, subunit G
Tssr46144 5 45670233 to 45670244 11 + TSS region transcription start site region 46144
Lcorl 5 45697181 to 45857615 160434 - protein coding gene ligand dependent nuclear receptor corepressor-like
Gm36401 5 45702733 to 45704760 2027 + lncRNA gene predicted gene, 36401
Gm3414 5 45719667 to 45727578 7911 - lncRNA gene predicted gene 3414
Gm21020 5 45755851 to 45757541 1690 - pseudogene predicted gene, 21020
Gm43201 5 45758275 to 45761690 3415 - unclassified gene predicted gene 43201
Gm29036 5 45768867 to 45769743 876 - pseudogene predicted gene 29036
Gm43200 5 45770020 to 45772180 2160 - unclassified gene predicted gene 43200
D5Ertd798e 5 45770142 to 45770359 217 DNA segment DNA segment, Chr 5, ERATO Doi 798, expressed
Tssr50912 5 45806679 to 45806683 4 - TSS region transcription start site region 50912
Tssr50913 5 45823428 to 45823432 4 - TSS region transcription start site region 50913
Tssr50914 5 45832144 to 45832161 17 - TSS region transcription start site region 50914
Cpgi15842 5 45856088 to 45858207 2119 CpG island CpG island 15842
Tssr50915 5 45856496 to 45856507 11 - TSS region transcription start site region 50915
Tssr46145 5 45857089 to 45857120 31 + TSS region transcription start site region 46145
Tssr50916 5 45857473 to 45857511 38 - TSS region transcription start site region 50916
4930449I04Rik 5 45857642 to 45858764 1122 + protein coding gene RIKEN cDNA 4930449I04 gene