MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:3840581-3943933

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Krit1	5	3803165 to 3844515	41350	+	protein coding gene	KRIT1, ankyrin repeat containing
Cpgi15514	5	3844945 to 3845449	504		CpG island	CpG island 15514
Tssr50000	5	3845017 to 3845050	33	-	TSS region	transcription start site region 50000
Tssr45069	5	3845171 to 3845192	21	+	TSS region	transcription start site region 45069
Lrrd1	5	3845173 to 3866596	21423	+	protein coding gene	leucine rich repeats and death domain containing 1
Tssr45070	5	3845195 to 3845202	7	+	TSS region	transcription start site region 45070
Rps4x-ps	5	3875362 to 3876154	792	+	pseudogene	Rps4x retrotransposed pseudogene
Mterf1a	5	3890581 to 3893933	3352	-	protein coding gene	mitochondrial transcription termination factor 1a
Tssr45071	5	3909290 to 3909299	9	+	TSS region	transcription start site region 45071
Tssr45072	5	3909310 to 3909321	11	+	TSS region	transcription start site region 45072
Tssr1415	5	3927533 to 3927544	11	+	TSS region	transcription start site region 1415
Tssr45073	5	3927821 to 3927843	22	+	TSS region	transcription start site region 45073
Akap9	5	3927827 to 4080204	152377	+	protein coding gene	A kinase (PRKA) anchor protein (yotiao) 9
Tssr45074	5	3927857 to 3927888	31	+	TSS region	transcription start site region 45074
Cpgi15515	5	3927864 to 3928991	1127		CpG island	CpG island 15515
Tssr45075	5	3928033 to 3928103	70	+	TSS region	transcription start site region 45075
Tssr45076	5	3928267 to 3928300	33	+	TSS region	transcription start site region 45076
Tssr45077	5	3936518 to 3936522	4	+	TSS region	transcription start site region 45077