Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:37838693-38131070

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm33993 5 37825755 to 37852040 26285 + lncRNA gene predicted gene, 33993
Cpgi15806 5 37875370 to 37875592 222 CpG island CpG island 15806
Cpgi15807 5 37893716 to 37894024 308 CpG island CpG island 15807
Gm20052 5 37893772 to 37897917 4145 + lincRNA gene predicted gene, 20052
D5Mit390 5 37936489 to 37936609 120 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 390
1700061D14Rik 5 37969956 to 37983600 13644 unclassified gene RIKEN cDNA 1700061D14 gene
Tssr46036 5 37983685 to 37983694 9 + TSS region transcription start site region 46036
Gm40289 5 37983693 to 37986070 2377 + lincRNA gene predicted gene, 40289
Tssr1468 5 37983708 to 37983720 12 + TSS region transcription start site region 1468
Gm43762 5 38027715 to 38028009 294 - unclassified gene predicted gene 43762
Stx18 5 38038742 to 38137765 99023 + protein coding gene syntaxin 18
Cpgi15808 5 38038923 to 38039889 966 CpG island CpG island 15808
Tssr46037 5 38039197 to 38039219 22 + TSS region transcription start site region 46037
Tssr46038 5 38039224 to 38039299 75 + TSS region transcription start site region 46038
Tssr46039 5 38039304 to 38039322 18 + TSS region transcription start site region 46039
Tssr46040 5 38076497 to 38076508 11 + TSS region transcription start site region 46040
Tssr46041 5 38076519 to 38076534 15 + TSS region transcription start site region 46041
Tssr46042 5 38076563 to 38076572 9 + TSS region transcription start site region 46042
D5Dmo2 5 38086438 to 38086558 120 DNA segment DNA segment, Chr 5, David Ornitz 2
Tssr46043 5 38108142 to 38108150 8 + TSS region transcription start site region 46043
D5Wsu148e 5 38128456 to 38128705 249 DNA segment DNA segment, Chr 5, Wayne State University 148, expressed