Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:36266938-36486981

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sorcs2 5 36017180 to 36398139 380959 - protein coding gene sortilin-related VPS10 domain containing receptor 2
Tssr50725 5 36277756 to 36277769 13 - TSS region transcription start site region 50725
Mir7689 5 36301570 to 36301628 58 + miRNA gene microRNA 7689
D5Mit75 5 36304140 to 36304289 149 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 75
Tssr50726 5 36317547 to 36317550 3 - TSS region transcription start site region 50726
Tssr50727 5 36321635 to 36321648 13 - TSS region transcription start site region 50727
D5Jcs76 5 36328573 to 36328725 152 DNA segment DNA segment, Chr 5, John C. Schimenti 76
D5Jcs30 5 36340597 to 36340808 211 DNA segment DNA segment, Chr 5, John C. Schimenti 30
D5Jcs31 5 36355103 to 36355261 158 DNA segment DNA segment, Chr 5, John C. Schimenti 31
Tssr45980 5 36374658 to 36374698 40 + TSS region transcription start site region 45980
Tssr45981 5 36374874 to 36374883 9 + TSS region transcription start site region 45981
Tssr50728 5 36376938 to 36376981 43 - TSS region transcription start site region 50728
Cpgi15777 5 36397229 to 36398655 1426 CpG island CpG island 15777
Tssr50729 5 36397671 to 36397706 35 - TSS region transcription start site region 50729
Tssr50730 5 36398060 to 36398063 3 - TSS region transcription start site region 50730
Tssr50731 5 36398068 to 36398075 7 - TSS region transcription start site region 50731
Tssr50732 5 36398078 to 36398085 7 - TSS region transcription start site region 50732
Tssr50733 5 36398090 to 36398149 59 - TSS region transcription start site region 50733
D5Jcs32 5 36414526 to 36414680 154 DNA segment DNA segment, Chr 5, John C. Schimenti 32
2210406O10Rik 5 36447611 to 36464853 17242 - lincRNA gene RIKEN cDNA 2210406O10 gene
D5Mit288 5 36450901 to 36451015 114 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 288
D5Ertd521e 5 36463635 to 36463859 224 DNA segment DNA segment, Chr 5, ERATO Doi 521, expressed
Cpgi15778 5 36464413 to 36465646 1233 CpG island CpG island 15778
Tssr45982 5 36464792 to 36464797 5 + TSS region transcription start site region 45982
Tssr45983 5 36465158 to 36465196 38 + TSS region transcription start site region 45983
Grpel1 5 36465185 to 36474077 8892 + protein coding gene GrpE-like 1, mitochondrial
Tada2b 5 36473670 to 36484285 10615 - protein coding gene transcriptional adaptor 2B
Cpgi15779 5 36483299 to 36486204 2905 CpG island CpG island 15779
Tssr50734 5 36484234 to 36484302 68 - TSS region transcription start site region 50734
Tssr45984 5 36484578 to 36484620 42 + TSS region transcription start site region 45984
Ccdc96 5 36484588 to 36488171 3583 + protein coding gene coiled-coil domain containing 96
Tssr45985 5 36484623 to 36484634 11 + TSS region transcription start site region 45985