Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:33873232-33993233

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nsd2 5 33820730 to 33897966 77236 + protein coding gene nuclear receptor binding SET domain protein 2
D5Jcs45 5 33885057 to 33885208 151 DNA segment DNA segment, Chr 5, John C. Schimenti 45
Nelfa 5 33898179 to 33936258 38079 - protein coding gene negative elongation factor complex member A, Whsc2
Mir7024 5 33898910 to 33898971 61 - miRNA gene microRNA 7024
Tssr50621 5 33933232 to 33933233 1 - TSS region transcription start site region 50621
Cpgi15744 5 33935477 to 33936768 1291 CpG island CpG island 15744
Tssr50622 5 33936230 to 33936296 66 - TSS region transcription start site region 50622
Tssr50623 5 33936301 to 33936353 52 - TSS region transcription start site region 50623
Gm42849 5 33947026 to 33948832 1806 + lincRNA gene predicted gene 42849
Gm42851 5 33947580 to 33948990 1410 - lincRNA gene predicted gene 42851
Tssr50624 5 33976438 to 33976442 4 - TSS region transcription start site region 50624
Gm30802 5 33982098 to 33983155 1057 - lncRNA gene predicted gene, 30802
Cpgi15745 5 33982731 to 33984398 1667 CpG island CpG island 15745
Tssr45840 5 33983090 to 33983100 10 + TSS region transcription start site region 45840
Gm1673 5 33983433 to 33985009 1576 + protein coding gene predicted gene 1673
Tssr45841 5 33983479 to 33983529 50 + TSS region transcription start site region 45841
Tssr45842 5 33983537 to 33983548 11 + TSS region transcription start site region 45842
Tssr45843 5 33983675 to 33983709 34 + TSS region transcription start site region 45843
Tssr45844 5 33983715 to 33983734 19 + TSS region transcription start site region 45844
Tssr45845 5 33983741 to 33983750 9 + TSS region transcription start site region 45845
Gm42847 5 33990510 to 33993062 2552 - unclassified gene predicted gene 42847