MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:33754254-33886731

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Letm1	5	33739675 to 33782704	43029	-	protein coding gene	leucine zipper-EF-hand containing transmembrane protein 1
Tssr45831	5	33759333 to 33759336	3	+	TSS region	transcription start site region 45831
Gm10059	5	33759366 to 33759536	170	+	pseudogene	predicted pseudogene 10059
Gm30708	5	33774912 to 33775223	311	+	pseudogene	predicted gene, 30708
Cpgi15742	5	33782109 to 33783204	1095		CpG island	CpG island 15742
Tssr50619	5	33782709 to 33782749	40	-	TSS region	transcription start site region 50619
Tssr50620	5	33782810 to 33782826	16	-	TSS region	transcription start site region 50620
Tssr45832	5	33799579 to 33799585	6	+	TSS region	transcription start site region 45832
Cpgi15743	5	33819254 to 33821731	2477		CpG island	CpG island 15743
Tssr45833	5	33820374 to 33820441	67	+	TSS region	transcription start site region 45833
Tssr45834	5	33820483 to 33820509	26	+	TSS region	transcription start site region 45834
Tssr45835	5	33820695 to 33820835	140	+	TSS region	transcription start site region 45835
Nsd2	5	33820730 to 33897966	77236	+	protein coding gene	nuclear receptor binding SET domain protein 2
Tssr45836	5	33821094 to 33821116	22	+	TSS region	transcription start site region 45836
Tssr45837	5	33828249 to 33828253	4	+	TSS region	transcription start site region 45837
Tssr45838	5	33854866 to 33854870	4	+	TSS region	transcription start site region 45838
Tssr45839	5	33859911 to 33859912	1	+	TSS region	transcription start site region 45839
D5Jcs45	5	33885057 to 33885208	151		DNA segment	DNA segment, Chr 5, John C. Schimenti 45