Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:33430455-33640487

Filter by:
22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi15732 5 33430168 to 33435562 5394 CpG island CpG island 15732
Nkx1-1 5 33430734 to 33433976 3242 - protein coding gene NK1 homeobox 1
Gm43851 5 33436625 to 33437464 839 - lincRNA gene predicted gene 43851
Cpgi15733 5 33438222 to 33438618 396 CpG island CpG island 15733
Cpgi15734 5 33442788 to 33443617 829 CpG island CpG island 15734
Tssr50603 5 33493404 to 33493408 4 - TSS region transcription start site region 50603
Tssr50604 5 33518970 to 33518981 11 - TSS region transcription start site region 50604
Tssr50605 5 33524171 to 33524182 11 - TSS region transcription start site region 50605
Cpgi15735 5 33534967 to 33535282 315 CpG island CpG island 15735
Tssr50606 5 33535455 to 33535487 32 - TSS region transcription start site region 50606
Tssr50607 5 33535623 to 33535630 7 - TSS region transcription start site region 50607
Cpgi15736 5 33540015 to 33540429 414 CpG island CpG island 15736
D5Jcs44 5 33566509 to 33566672 163 DNA segment DNA segment, Chr 5, John C. Schimenti 44
Fam53a 5 33600347 to 33629635 29288 - protein coding gene family with sequence similarity 53, member A
Cpgi15737 5 33628830 to 33630375 1545 CpG island CpG island 15737
Tssr50608 5 33629535 to 33629544 9 - TSS region transcription start site region 50608
Tssr50609 5 33629577 to 33629649 72 - TSS region transcription start site region 50609
Tssr45824 5 33629915 to 33629930 15 + TSS region transcription start site region 45824
Gm9903 5 33629925 to 33632092 2167 + protein coding gene predicted gene 9903
Tssr45825 5 33629949 to 33629964 15 + TSS region transcription start site region 45825
Gm40279 5 33632267 to 33633043 776 + lncRNA gene predicted gene, 40279
Slbp 5 33640055 to 33652574 12519 - protein coding gene stem-loop binding protein