MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:33268099-33368293

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ctbp1	5	33247723 to 33274994	27271	-	protein coding gene	C-terminal binding protein 1
Tssr50599	5	33270641 to 33270660	19	-	TSS region	transcription start site region 50599
Cpgi15729	5	33273894 to 33275509	1615		CpG island	CpG island 15729
Tssr50600	5	33274954 to 33274965	11	-	TSS region	transcription start site region 50600
Tssr50601	5	33274966 to 33275010	44	-	TSS region	transcription start site region 50601
Tssr45813	5	33288059 to 33288063	4	+	TSS region	transcription start site region 45813
Gm20465	5	33293612 to 33297473	3861	-	lincRNA gene	predicted gene 20465
D5Mit388	5	33318099 to 33318293	194		DNA segment	DNA Segment, Chr 5 Massachusetts Institute of Technology 388
Del(5D5Mit388-D5Mit351)4Jcs	5	33318099 to 37019120	3701021		chromosomal deletion	deletion, Chr 5, John C. Schimenti 4
Mom5	5	33318293 to 8797672	-24520621		QTL	modifier of Min 5
Cpgi15730	5	33335087 to 33336318	1231		CpG island	CpG island 15730
Tssr45814	5	33335540 to 33335571	31	+	TSS region	transcription start site region 45814
Maea	5	33335572 to 33373294	37722	+	protein coding gene	macrophage erythroblast attacher
Tssr50602	5	33335796 to 33335804	8	-	TSS region	transcription start site region 50602
Tssr45815	5	33336227 to 33336254	27	+	TSS region	transcription start site region 45815
Tssr45816	5	33336270 to 33336281	11	+	TSS region	transcription start site region 45816
Tssr45817	5	33337056 to 33337060	4	+	TSS region	transcription start site region 45817
D5Jcs35	5	33353697 to 33353843	146		DNA segment	DNA segment, Chr 5, John C. Schimenti 35